1JDB,1CS0,1C30


Conserved Protein Domain Family
CarA

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COG0505: CarA (this model, PSSM-Id:223579 is obsolete and has been replaced by 440271)
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Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223579
Aligned: 55 rows
Threshold Bit Score: 468.207
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JDB_F      2 I----------------------KSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPH 59   Escherichia coli
3915641     1 -----------------------MEAVLILEDGTILKGKGFGAEKEVFGELVFTTVMTGYVEVLTDPSYKGQIVMMTYPL 57   Methanocaldococcu...
21759037    1 -----------------------------MEDGSVFAGRLIGAEKIAVGEVVFTTSVVGYPQTLTDPSYKGQIITFTMPL 51   Pyrobaculum aerop...
1172781    34 DpkeptcspspafysvngemkdyKLMALELEDKSVLQGYSFGADHSVSGELVFQTGMVGYPESLTDPSYRGQILVFTFPT 113  fission yeast
19113500   43 N----------------------EIATLTIRNGPIFHGTSFGANRNVSGEAVFTTSPVGYVESLTDPSYKQQILIFTQPL 100  fission yeast
2500030     5 N----------------------KKGYLYLEDGTFIEGYSFGAKGIKVGEVVFTTSMNGYVESLTDPSYKGQILIITHPL 62   Sulfolobus solfat...
21759041    1 -----------------------MKKYLVMEDGTVLSGQGYGSYKEAYGELVFTTSMTGYLETLTDPSYVGQMLVFASPT 57   Thermoplasma volc...
21759050    1 -----------------------MKRYLITSDGTVIAGYGYGSPVTGYGELVFTTSMTGYLESMTDPSYVGQILVFASPT 57   Thermoplasma acid...
1172782    19 D----------------------RLVTLELKDGTVLQGYSFGAEKSVAGELVFQTGMVGYPESVTDPSYEGQILVITYPL 76   baker's yeast
115625      5 A----------------------TKATFCIQNGPSFEGISFGANKSVAGETVFTTSLVGYPESMTDPSYRGQILVFTQPL 62   baker's yeast
1JDB_F     60 IGNVGTNDADEEs------------SQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGA 127  Escherichia coli
3915641    58 EGNYGVKKDWFEs------------DGIKAEGFVVREVT------S--KALDDFLKEYDIPGIQDIDTRFLTRKIRDKGV 117  Methanocaldococcu...
21759037   52 IGNYGVSE---Dql---------esDGIKAEGVVLFEATFP-SHYKSVMSLEEWLASSGVPGVARVDTRALVQMLREHGV 118  Pyrobaculum aerop...
1172781   114 VGNYGVPDRRILdeisgl-pkyfesNQIHVAAIIISSYSQNYSHFLAHSSLGEWLKEQGIPGIFGIDTRALTKKIRDQGS 192  fission yeast
19113500  101 IGNYGVPDCKKRdengll--rhfesPHIQCAGVVVNDYATKYSHWTAVESLGEWCAREGVAAITGVDTRAIVTFLREQGS 178  fission yeast
2500030    63 VGNYGVPEKKYEqgilt----nfesERIQVEGLIVAEHTYP-SKWNSALTLDEWLKSENVPGVFDVDTRMIVKKIRTYGT 137  Sulfolobus solfat...
21759041   58 IANYALEMGKMEs------------NGVKVSALITKDAHIELKKGGYGREFDEFLKEQGIPGIDGIDTRMLVRKIRANGV 125  Thermoplasma volc...
21759050   58 IANYELRKGVMEs------------DRVKVSGIVTRDAHINMPAGTLGLDFDRFLRDEGIPAIDGVDTRLLVRKIRQGGV 125  Thermoplasma acid...
1172782    77 VGNYGVPDMHLRdelveelpryfesNRIHIAGLVISHYTDEYSHYLRKSSLGKWLQNEGIPAVYGVDTRSLTKHLRDAGS 156  baker's yeast
115625     63 IGNYGVPSGEARdeynll--kyfesPHIHVVGIVVAEYAYQYSHWTAVESLAQWCQREGVAAITGVDTRELVQYLREQGS 140  baker's yeast
1JDB_F    128 QNGCIIAGD--------NPDAA-------LALEKARAFPGLNGMDLAKEVTTAEAYSWTQgs---wtLTGGlpqakkeDE 189  Escherichia coli
3915641   118 VKSCLKVA---------EEISDde---isELLERVKRYSDISDIDLVPLVSTKEPKIHKT-------ANPKa-------- 170  Methanocaldococcu...
21759037  119 MMGAIGPEDpa----------------vlMEALRK--SPHYEDVVYVDMVSVKEPVLLGE-------------------- 160  Pyrobaculum aerop...
1172781   193 MLGRLLIQKdespinpsSITGLgkdwstaFEDIP---WKNPNTENLTSQVSIKEPKLYEPhp---ttAIKKa------DG 260  fission yeast
19113500  179 SLAKISIGEey------dAN-----------DDEA--FINPEEVNLVSQVSTREPFFVSG------------------GD 221  fission yeast
2500030   138 MMGIIASEl-------------------eIDDPRKYLEKKYDEIDFTQFTSPKSPIFHPN-------------------- 178  Sulfolobus solfat...
21759041  126 LRSYVVNDP-----------------------SHSLDFPDPMNDDLVSKAVPHHDPVFVK------------------GE 164  Thermoplasma volc...
21759050  126 LRAYIADDP-----------------------QGHSDFPDPMSENLVARAVDARGVKNIR------------------GK 164  Thermoplasma acid...
1172782   157 MLGRLSLEKsgs---drTIS-RssswrsaF-DVPE--WVDPNVQNLVSKVSINEPKLYVPpadnkhiELQTg-----pDG 224  baker's yeast
115625    141 SLGRITLADh---------------------DPVP--YVNPMKTNLVAQVTTKKPFHVSAl----------------pGK 181  baker's yeast
1JDB_F    190 LPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDP--APCDYAITAIQKFLETDI---- 263  Escherichia coli
3915641   171 ---rCVLIDCGVKLNIIRSLVQRNCEVIQVPYNTKYDEILEYKPDFVLISNGPGDP--ARLKEVIKNIKNLIGVV----- 240  Methanocaldococcu...
21759037  161 GRLCIGVVDCGVKRSIVREFLKRGVRVKLVPCRRTE---LAFDCDALFISNGPGNP--KLLDFLSAKVSEYVEYk----k 231  Pyrobaculum aerop...
1172781   261 KIIRILVIDVGMKYNQIRCFLNRGVELLVVPWDYDFT---KETYDGLFISNGPGDP--SLMDLVVDRVKRVLESkt---v 332  fission yeast
19113500  222 GMLNIAVIDCGVKENILRSLVSRGASVTVFPFDYPIQN-VASNYDGIFLTNGPGDP--THLTKTVNNLRELMN--Tyn-g 295  fission yeast
2500030   179 TGDMIVVVDCGIKHGILYGLYKRGFSIVRVPCSFSASKIIEYNPKGIVFSNGPGNP--NLLENQIKTFSELVEYk----i 252  Sulfolobus solfat...
21759041  165 EGGTVLFIDLGSK-NTLKELMLQNFSLIVVDKQTNLDEI--EGYDAIFVSNGPGDPshPSLSNVIKFLSHNIGVK----- 236  Thermoplasma volc...
21759050  165 GERRILFIDLGSK-KTLRDMMLEHFSLIMASADSDLDAI--DKYDAIFVSNGPGDPdhPSLRPVVNFLKRNIGVK----- 236  Thermoplasma acid...
1172782   225 KVLRILAIDVGMKYNQIRCFIKRGVELKVVPWNYDFT---KEDYDGLFISNGPGDP--SVLDDLSQRLSNVLEAkk---t 296  baker's yeast
115625    182 AKANVALIDCGVKENIIRCLVKRGANVTVFPYDYRIQD-VASEFDGIFLSNGPGNP--ELCQATISNVRELLNNPVydci 258  baker's yeast
1JDB_F    264 PVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDV-EKNVVMITAQNHGFAVDEAtlpANLR----VTHKSLFDGTLQ 338  Escherichia coli
3915641   241 PITGICLGNQLLSLAFGGETYKMKFGHRGGNQPVKDL-KTQKVYITSQNHGFAVRKE---SLPdd-veVSFINLNDMTVE 315  Methanocaldococcu...
21759037  232 PLMGICLGHQVIAMALGAGIYKLKFGHRASNKPVRDIrFTGRTYITTHNHGYAVDPRgtd------lkVWAVQPDDGTVE 305  Pyrobaculum aerop...
1172781   333 PVFGICFGHQIMARAAGASTTKMKFGNRGHNIPCTCM-ISGRCYITSQNHGYAVDASs---lSng-wkELFVNANDGSNE 407  fission yeast
19113500  296 PIMGICMGHQLLALSTGAKTIKLKYGNRGHNIPALDI-ASGNCHITSQNHGYAVDASt---lPae-wkATWTNLNDQSNE 370  fission yeast
2500030   253 PILGICLGHQIATLALGGKIKKMKFGHRAINKPVIES-NSNKCYISTHNHGYGIISKn---dIPpntkIWFYNPDDYTIE 328  Sulfolobus solfat...
21759041  237 PLFGICFGLQAISLAYGAKTYKMKFGHRGSNHAVTDG---THSYVTTHNHGYAVDGS---TVKDf--kVIGWDANDGTVE 308  Thermoplasma volc...
21759050  237 PIFGICFGLQIIALAYGSKTYKMKFGHRGSNHAVTDG---NRIYVTTHNHGYAVDPD---TVRDf--hVRERDINDGTIE 308  Thermoplasma acid...
1172782   297 PVFGICLGHQLIARAAGASTLKLKFGNRGHNIPCTST-ISGRCYITSQNHGFAVDVDt---lTsg-wkPLFVNANDDSNE 371  baker's yeast
115625    259 PIFGICLGHQLLALASGASTHKLKYGNRAHNIPAMDL-TTGQCHITSQNHGYAVDPEt---lPKdqwkPYFVNLNDKSNE 334  baker's yeast
1JDB_F    339 GIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT 380  Escherichia coli
3915641   316 GIRHKDLPIFSVQFHPEARPGPHDTMFLFDEMIKLKDRK--- 354  Methanocaldococcus jannaschii
21759037  306 GLYHERLPILTTQWHPEASPGPQDTRWVFDKFLKLVERHGH- 346  Pyrobaculum aerophilum
1172781   408 GIYNTEYPFFSVQFHPESTPGPRDTEFLFDVFIDVVKRSADA 449  fission yeast
19113500  371 GIAHVSRPISSVQFHPEARGGPMDTFYLFDNYIKEAIKYQKS 412  fission yeast
2500030   329 GLIHEKLPIITTQFHPEARPGPWDTTWVFDKFRTMVTGK--- 367  Sulfolobus solfataricus
21759041  309 IIEGDD--MFAVQFHPEASPGPHDTRWFFGEMKRRIGYA--- 345  Thermoplasma volcanium
21759050  309 MIEDGM--MMAVQYHPEASPGPHDTRWFFSEMRRRTEDAAKG 348  Thermoplasma acidophilum
1172782   372 GIYHSELPYFSVQFHPESTPGPRDTEFLFDVFIQAVKEFKYT 413  baker's yeast
115625    335 GMIHLQRPIFSTQFHPEAKGGPLDTAILFDKFFDNIEKYQLQ 376  baker's yeast
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