Conserved Protein Domain Family
RfaB

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COG0438: RfaB 
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 223515
Aligned: 488 rows
Threshold Bit Score: 52.2579
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
11497665  309 FGLPVVEAMAcgAPVIGSDSSSIAEIIKRSDAL-F---NPKDINSISSkilevle-ndefreeLRRYGLKRAKDFSWRES 383  Archaeoglobus ful...
15600642    3 RLLVECTYVFehPKVNSGIQRVVRNVIRELPEAdEtveCIPVAMLDGTlyqvhslapldprphSPLVRLRILVERAANYF 82   Pseudomonas aerug...
18311948    1 MRVLIISR----LLWTAGAQRIAINEYHWLKRL-G---YDTELVFLRR---------------GNVTGYEELLEEVN--- 54   Pyrobaculum aerop...
15897694      --------------------------------------------------------------------------------      Sulfolobus solfat...
15898446      --------------------------------------------------------------------------------      Sulfolobus solfat...
15898583      --------------------------------------------------------------------------------      Sulfolobus solfat...
13541708    2 KIIILVRILWtaGAQKIAIAEAKQLTKMGYKVK-L---VFLRATESGR---------------NLLNKLEDIDYEIFSGE 62   Thermoplasma volc...
16081784    1 MVNIDKIIGInnLPLANGLGEYAKRMEAVLGKN------ILSLVMDKR-----------------YKDMDYAGRKIYG-- 55   Thermoplasma acid...
15606367    7 FYTKLSKQLDyfCNTLRNNYELICEDITKYKKFrLn--SYDRIVVWIEnfnnvlldyldnihpVIILPKNLENANLDLLD 84   Aquifex aeolicus
15605984    1 MIINIMERLImnSIYIDGLFYKGSGIGRYYEFS-I---QELSQYAIIY----------------IYVPMKFKNEFYQQFG 60   Aquifex aeolicus
11497665  384 aknilkffkekfgygksvaYLFRKPRMAylsplppaqsGISYYSSELLPELSKyyevelivnqndvsdeyvranfpirtv 463  Archaeoglobus ful...
15600642   83 wlgq-----------rtleKRRPFRSSPwarrllyvacRLFAFAFLSIPLRLLdrilgkq-------------------- 131  Pseudomonas aerug...
18311948   55 --------------------YKVVRRGHg---------PLTPFFYTLTKIFAPdr------------------------- 80   Pyrobaculum aerop...
15897694      --------------------------------------------------------------------------------      Sulfolobus solfat...
15898446      --------------------------------------------------------------------------------      Sulfolobus solfat...
15898583      --------------------------------------------------------------------------------      Sulfolobus solfat...
13541708   63 -------------------NYKPKLIYS----------FITGLFMLDRRGEGt--------------------------- 86   Thermoplasma volc...
16081784   56 -------------------YYPPITNG------------YLLNVYLSRSILK---------------------------- 76   Thermoplasma acid...
15606367   85 ekliyyafgwnglkllkdeRKDLYLLALlkllinkskgAILSKDFTKLKKYWLinrn----------------------- 141  Aquifex aeolicus
15605984   61 -------------------NNDKIVPIS-----------TKYEKFSLKGl------------------------------ 80   Aquifex aeolicus
11497665  464 eyftknfrkyervlyhmgnsefhahmwellesyPGVVVLHDFFLSNFLwwasqgrrevlerelffshgfkglidlkesle 543  Archaeoglobus ful...
15600642  132 --------------------------qpapvraTPLEHRAGDQLVLLDss------------------------------ 155  Pseudomonas aerug...
18311948   81 -------------------------------glESTVDLDLIFKIPKIak------------------------------ 99   Pyrobaculum aerop...
15897694    1 ---------------------------------------MMFTIALRVl------------------------------- 10   Sulfolobus solfat...
15898446    1 ----------------------------------------MFTIALRVl------------------------------- 9    Sulfolobus solfat...
15898583    1 -----------------------------------------MDIVLRIl------------------------------- 8    Sulfolobus solfat...
13541708   87 ---------------------------------VDYNLINKFARSVKK-------------------------------- 101  Thermoplasma volc...
16081784   77 ----------------------------------KYYKGKFPHLLSP--------------------------------- 89   Thermoplasma acid...
15606367  142 -----------------------------rvkfSDNFFTHSIVEAIEEiy------------------------------ 162  Aquifex aeolicus
15605984   81 ---------------------------------LIQSKILKSLENKVYlf------------------------------ 97   Aquifex aeolicus
11497665  544 kavweyPINLRILQNAIGIIVHSEHSIELAKEFYETEKEKFSIIPQMRKVEKIRDKKvakkefgYEDETFLICSFGiivn 623  Archaeoglobus ful...
15600642  156 ----whADFFPLAERLKSEGVGIVSVIYDLIPLTHPQFCDAGLVKVFNHWFDWIAAT--------ADGYVAISETIrde- 222  Pseudomonas aerug...
18311948  100 -----kEGADYLICHDQFTGIGCYQAYRKYG-IPYTIFIHEKVVNYRQPIFGKIIN--------NIEKEILLNAKK---- 161  Pyrobaculum aerop...
15897694   11 ------WNGGVAR------IAVEQARNAK-AKLLVYRESFYN---YDLSG--------------IYVEFLRRKGEKgflt 60   Sulfolobus solfat...
15898446   10 ------WNGGVAR------IAVEQARNAK-AKLLVYRESFYN---YDLSG--------------IYVEFLRRKGEKgflt 59   Sulfolobus solfat...
15898583    9 ------WTGGVTR------VALEEARNIPGSKLIVYRRARTY---YDLSN--------------VNLQVLFEGKSKai-- 57   Sulfolobus solfat...
13541708  102 ------GDADYIICHDQWAGLAGLKIKRKLGIPYSVMMHEHVNGKYNVPVLGKIAT--------KMERDVLKNADK---- 163  Thermoplasma volc...
16081784   90 --------FFYLGSEYESKSIITIHDTYYK----WEKNKMQRLSKKIVRKYRSFKN---------IISISEQTKN----- 143  Thermoplasma acid...
15606367  163 -----rKDALEQVIKIFSSFISTDIQAKRLSKLVASNFYPNLYERKLFFDISLLRVKeggtgihRVVKAQLNCFLEnftp 237  Aquifex aeolicus
15605984   98 -----fFPHINLPLYISQNTVVTVHDLRPFTEYWDRGEFKKLIIKKLFFDRAIKYS--------KAIISISKTTKN---- 160  Aquifex aeolicus
11497665  624 tkmtelivdaflssslpEKGCVLVLVGKtfddeygirvlakaknsgGKVKVTGWVDEETWKKYleacdlavqlrtlsrge 703  Archaeoglobus ful...
15600642  223 ---------------vrAEMLRRIGPEKva--------------qrWFDYFHLGSELDLVEDGas--------------- 258  Pseudomonas aerug...
18311948  162 -----------------VFAVTDKVAQTine-------------khGIKAIPNYPGMDKIS------------------- 192  Pyrobaculum aerop...
15897694   61 -------------plfrRITEIYAKNRGd----------------eATVDLDLIVKASRIIKGpalfhdqfagitgylrk 111  Sulfolobus solfat...
15898446   60 -------------plfrKITEIYAKNRGd----------------eATVDLDLIVKASRIIKEpalfhdqfagitgylrk 110  Sulfolobus solfat...
15898583   58 ---------------yrFITSIYAGHRGd----------------eATVDLDRIIKARDLIKGpalfhdqfsgltgylrw 106  Sulfolobus solfat...
13541708  164 -----------------IFAVTEKIANN------------------VTSIYGFKCEPDLVGMT----------------- 191  Thermoplasma volc...
16081784  144 -----------------DLIADGYDADN-------------------ISVIYNYIDPIFRK------------------- 168  Thermoplasma acid...
15606367  238 kfraepsyitvengkvtVKYAREFIKNYlkiqtntlsdvplliregDIYYLPDYYPLLTLEAYksgffdylkfkktktvf 317  Aquifex aeolicus
15605984  161 -----------------DLLKFYSEVQN------------------KIVVIYETFSINKKST------------------ 187  Aquifex aeolicus
11497665  704 vsraildclafgiptianahgfikylpnevvyklsenpskeelrealerlhedsslRDRISKNARkyveenlnpreiakr 783  Archaeoglobus ful...
15600642  259 -------------------------------------------------------vEPDLLRMFKa-------------- 269  Pseudomonas aerug...
18311948  193 --------------------------------------------------------ERHFSEKE---------------- 200  Pyrobaculum aerop...
15897694  112 vfdgedyai---------------------ylhetsltlkgikylipkvmerkvleDAKIVLTNSqwnkriledkgikae 170  Sulfolobus solfat...
15898446  111 vfhgedyai---------------------ylhetsltlkgikylipkvmerkvleGAKIILTNSqwnkrvledkgmgae 169  Sulfolobus solfat...
15898583  107 rkykedygv---------------------yihetsldsrsvkwflprylekivlsHSRVIITNSrwnaeilsshgfkae 165  Sulfolobus solfat...
13541708  192 --------------------------------------------------------LQKTKNFHEr-------------- 201  Thermoplasma volc...
16081784  169 --------------------------------------------------------LESINKDE---------------- 176  Thermoplasma acid...
15606367  318 lvydlipikfpeyfpkrfnkiheiwlkivletsdliftisntvkedilefskkknlPFPEEKIKVlplgaetekapnvtk 397  Aquifex aeolicus
15605984  188 --------------------------------------------------------ETKQNIVG---------------- 195  Aquifex aeolicus
11497665  784 fyeaiekfysrvndseiiekisqieiprnerffdeiskhlektfpaspkqRKILVDVSEIVKvdrHTGIQRVVKSLINEL 863  Archaeoglobus ful...
15600642  270 -------------------------------------------------kAPVFLMVSTIEP---RKNHGYLLDAFERAW 297  Pseudomonas aerug...
18311948  201 ---------------------------------------------------DVLLAVSFWDLg---RRPWDYLEVVKHLD 226  Pyrobaculum aerop...
15897694  171 v----------------------------------lypgcypidkieedkENFVLTVSMWDE---GRKPEIYGEIAKRIK 213  Sulfolobus solfat...
15898446  170 v----------------------------------lypgcytideveedkENFVLAVSMWDE---GRRPEIYGEIAKRIK 212  Sulfolobus solfat...
15898583  166 v----------------------------------vypgcypkerinldrERIVLAVSLWDE---GRRPEIYGEIAKRIK 208  Sulfolobus solfat...
13541708  202 --------------------------------------------------DNIILATSTWGK---DRSPDTYLDIIEAIP 228  Thermoplasma volc...
16081784  177 ---------------------------------------------------KTVLTVGDGIH-----KNNILVNKIVNG- 199  Thermoplasma acid...
15606367  398 ------------------------------------vsekekeiiqkvskEPFFLMVSTLEP---RKGHFQVLKAFEILW 438  Aquifex aeolicus
15605984  196 ---------------------------------------------------DYLLYVGQFKK---HKNLDRLLKAFSMIK 221  Aquifex aeolicus
11497665  864 LSIAPkkirvepvyfdENIGIYRYARKWagkilnldYEFLDDelvDFRKGDILLLLDF-YTYQNphkkgiywelkasgvk 942  Archaeoglobus ful...
15600642  298 AQGSQ-----------ARLCIAGRIG-----------WKCEAlveRVRQHPELNKRLFmFNDLS---------------- 339  Pseudomonas aerug...
18311948  227 ----------------YKLILAGNWRVKka-----kEKVVES----IKLMGLKDKVSL-VEGIS---------------- 264  Pyrobaculum aerop...
15897694  214 G----------------KLIMAGSWARR---------DTMEE---FKRKYP-EVIVTG-NIS------------------ 245  Sulfolobus solfat...
15898446  213 G----------------RLIMAGSWARR---------DTMEE---FKRKYP-EVIVTG-RIS------------------ 244  Sulfolobus solfat...
15898583  209 G----------------KLIMAGSWARK---------DTLEE---FKRKYG-DVIVTG-PLK------------------ 240  Sulfolobus solfat...
13541708  229 D---------------FKLYFIGRWNLKs------eFEDFKN---NVYKRNLQEKVII-NDNMP---------------- 267  Thermoplasma volc...
16081784  200 -----------------RYYHIHIGK-------------------EVRADENYSGIST---------------------- 221  Thermoplasma acid...
15606367  439 KKGIN-----------VNLVIVGKEGWK--------VRKLVK---HIKKHRFLGKHLFwFGYVSd--------------- 481  Aquifex aeolicus
15605984  222 NKIK------------CKLVIAGKKDN----------IDIYN---SIKSLNLGDRVVV-IKNPS---------------- 259  Aquifex aeolicus
11497665  943 ivsvvydilplkrpkwfidgmnewfreyietlaeisdkiicisestANDLSEYLKKENLLRSNLKItsihlgaeiEKFGT 1022 Archaeoglobus ful...
15600642  340 ----------------------------------------------DKSLEYAYSHAASLVFPSYV---------EGFGL 364  Pseudomonas aerug...
18311948  265 ----------------------------------------------ENQLRELYNKAKFVIRFGYG----------EFGP 288  Pyrobaculum aerop...
15897694  246 ----------------------------------------------EDKLRELYKKASLTIRFGFN----------ER-G 268  Sulfolobus solfat...
15898446  245 ----------------------------------------------EDKLRELYKKASLTIRFGFD----------ER-G 267  Sulfolobus solfat...
15898583  241 ----------------------------------------------EEELQNLYNRASVLIRFGFN----------EK-G 263  Sulfolobus solfat...
13541708  268 ----------------------------------------------DEELDELYASSKFVIRFGGT---------KEYGL 292  Thermoplasma volc...
16081784  222 -----------------------------------------------EELVKLYNRASVLIRLSDY---------EGFGY 245  Thermoplasma acid...
15606367  482 -----------------------------------------------ELLKELYKRALALIAASED---------EGFGL 505  Aquifex aeolicus
15605984  260 ----------------------------------------------DGELINLYKNAKFFISPSLY---------EGFGL 284  Aquifex aeolicus
11497665 1023 RglpdnwgdlvkLLQSKpsflMVGtiEPRKGHRQTlSAFEILWRDGydvnlvivgkEGW-LTQDVieriknHPELNRRLF 1101 Archaeoglobus ful...
15600642  365 P-----------LVEAM----QRG--LPAMGSDIP-VFREIGGEFM-----------AYfDLADP--------QTLANLV 407  Pseudomonas aerug...
18311948  289 Ai---------sVIEAI----QHT--TPVIINDEL-GTAELVKRYN----------LGL-VVHGi------DVRSIKEFI 335  Pyrobaculum aerop...
15897694  269 Pgm--------avLESL----CNG--TAVIANDG--LGGKEFVIEGe---------NGY-VVK--------DWKEAVDRI 314  Sulfolobus solfat...
15898446  268 Pgm--------avLESL----CNG--TAVIVNDG--IGGKEFVIEGe---------NGY-VVK--------DWKEAVDRI 313  Sulfolobus solfat...
15898583  264 Pgm--------gvLEAM----SYG--LPIIVNDG--LGSKELIKD-----------NGY-VVK--------DWGEAVDRI 307  Sulfolobus solfat...
13541708  293 G-----------TATVF----AIShlTPVIIDSTL-GISDIITKYG----------GGY-IVDKN------DINKISNFI 339  Thermoplasma volc...
16081784  246 P-----------PLEAL----FCG--TPAVVSDIA-VFRELLGDS------------AVyVKKDE--------VSILDGI 287  Thermoplasma acid...
15606367  506 P-----------IVEAF----RNN--TPVIARDIK-VFREIAGDN------------AFfFENTK------NPEVIANAI 549  Aquifex aeolicus
15605984  285 P-----------PLESL----NYD--VPVILSDIP-VFREIYEDIA-----------IY-FNPFS-------EENIAEKI 327  Aquifex aeolicus
11497665 1102 WINNASDefldKIYRACTAlimasedegFGLPIVE-AAYRGLSIIARDIKVFREIARDG 1159 Archaeoglobus fulgidus
15600642  408 TRFEATG----EFPAERPVg---------EWRWIGwHEASRQLIARILLALGKAPAHGE 453  Pseudomonas aeruginosa PA01
18311948  336 NKIDEKT------YSQLQD----------NIKKVQ-NIYTWLNHVTKLIDTITFKQ--- 374  Pyrobaculum aerophilum
15897694  315 NEVLENH----KLRRSLSI---------NALETS--KKYSWRNHANKLTEIMEKLV--- 355  Sulfolobus solfataricus
15898446  314 NEVLENH----KLRRSLSI---------NALETG--KKYSWRNHAIKLTEIMEKLA--- 354  Sulfolobus solfataricus
15898583  308 NEILEDE----KLRKEMSI---------RSWEIA--KELSWKNHAMRIKELMEEKIGE- 350  Sulfolobus solfataricus
13541708  340 LENNNEIn-----YEKLQN----------NLLNIT-REYTWERHCRILMNVLK------ 376  Thermoplasma volcanium
16081784  288 EYAIQNR------KEMLNR-----------FESKIkSRYTKERFISNMIKYYKDL---- 325  Thermoplasma acidophilum
15606367  550 KTWLELY-----RKGLHP-----------KPANLKqYKYTWENHCKLLIKYLTEI---- 588  Aquifex aeolicus
15605984  328 IFALSNYn---SIKQKTVS----------EKDKIF-NKFEKRKIVKQYLELFNKIIKGE 372  Aquifex aeolicus
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