Conserved Protein Domain Family
LysA

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COG0019: LysA 
Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Statistics
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PSSM-Id: 223098
Aligned: 76 rows
Threshold Bit Score: 257.205
Threshold Setting Gi: 15900104
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15891734 136 MTTARILDFIK----------TRRPEGPCLVVDLDVVRDNFNAFRHSLPN--SAIYYAVKANPAPEILKLLAS-LGSNFD 202 Agrobacterium tumef...
15616520   1 -------MFVKmrf--------eeLPTPCYVVDEALVEKNVKILNGIMKRtgAKIVLAQKAFSMSTMYPLIGK-YLTGTT 64  Bacillus halodurans
15792828   1 -------------------mfyekIQTPAYILEEDKLRKNCELLASVGEKsgAKVLLALKGFAFSGAMKIVGE-YLKGCT 60  Campylobacter jejuni
15806427   8 TASALPADLHLpavtdpqtvdWDRIPSPAFVLDETRLRRNLTLINYVQQQsgAQIIVAFKGFSMWSTFPLLREyGITGAT 87  Deinococcus radiodu...
15644653   1 ----------Mkky--------stIPTPCYVLESERLEKNAKILEIVRQQsgAKVLLALKGYAFWREFGILRQ-KLNGCC 61  Helicobacter pylori...
15602236   1 -------------------mrmttLQTPYYLIDKSKLLRNMEKIAYLREKsgAKALLALKCFATWGVFDFMCQ-YMDGTT 60  Pasteurella multocida
15900800   1 -------------------mkleqVPTPAYVIDLAKLEANCRILQYVQEEagCKVLLAQKAYSLYKTYPLISQ-YLSGTT 60  Streptococcus pneum...
15641630   1 -METLQDIGTNmlk--------deLRTPYFMIDEAKLIANLEIAKHLKEIsgVKMVLALKCFSTWGVFDIIKP-YLDGTT 70  Vibrio cholerae
15611089   1 ----------Mkky--------saIPTPCYALESERLEKNAKILEIVRQQsgAKVLLALKGYAFWREFGILRQ-KLNGCC 61  Helicobacter pylori...
16330194   1 mssfavnILENprl--------ssLPSPCFVLEEELLQQNLAIFERLQQSapIEVMLALKGFALFPCFPWLRS-GLAGAS 71  Synechocystis sp. P...
15616520   1 -------MFVKmrf--------eeLPTPCYVVDEALVEKNVKILNGIMKRtgAKIVLAQKAFSMSTMYPLIGK-YLTGTT 64  Bacillus halodurans
15792828   1 -------------------mfyekIQTPAYILEEDKLRKNCELLASVGEKsgAKVLLALKGFAFSGAMKIVGE-YLKGCT 60  Campylobacter jejuni
15806427   8 TASALPADLHLpavtdpqtvdWDRIPSPAFVLDETRLRRNLTLINYVQQQsgAQIIVAFKGFSMWSTFPLLREyGITGAT 87  Deinococcus radiodu...
15644653   1 ----------Mkky--------stIPTPCYVLESERLEKNAKILEIVRQQsgAKVLLALKGYAFWREFGILRQ-KLNGCC 61  Helicobacter pylori...
15602236   1 -------------------mrmttLQTPYYLIDKSKLLRNMEKIAYLREKsgAKALLALKCFATWGVFDFMCQ-YMDGTT 60  Pasteurella multocida
15900800   1 -------------------mkleqVPTPAYVIDLAKLEANCRILQYVQEEagCKVLLAQKAYSLYKTYPLISQ-YLSGTT 60  Streptococcus pneum...
15641630   1 -METLQDIGTNmlk--------deLRTPYFMIDEAKLIANLEIAKHLKEIsgVKMVLALKCFSTWGVFDIIKP-YLDGTT 70  Vibrio cholerae
15611089   1 ----------Mkky--------saIPTPCYALESERLEKNAKILEIVRQQsgAKVLLALKGYAFWREFGILRQ-KLNGCC 61  Helicobacter pylori...
16330194   1 mssfavnILENprl--------ssLPSPCFVLEEELLQQNLAIFERLQQSapIEVMLALKGFALFPCFPWLRS-GLAGAS 71  Synechocystis sp. P...
15891734 203 CASVAEIQMALDAg--ATSD-RISFGNTIKKERDVARAHALGIDlFAVDSHEEVEKVARAAPG------------ARVFC 267 Agrobacterium tumef...
15616520  65 ASGLYEARLGHEEmg-----kENHIFAPAYREDEIDEIVSICDH-IIFNSFSQLEKFKQRALDa----------gSKVGL 128 Bacillus halodurans
15792828  61 CSGLWEAKFAKEYmd-----kEIHTYSPAFKEDEIGEIASLSHH-IVFNSLAQFHKFQAKTQkn------------sLGL 122 Campylobacter jejuni
15806427  88 ASSLNEAILAKEEmq-----gEVHVYAPAYSDEDFPRILELADH-LVFNSFAQWERFRPQVQAarag-----greLHVGI 156 Deinococcus radiodu...
15644653  62 ASGLYEAKLAFEEfggRESHkEICVYSPAFKEAEMSAILPLATS-IIFNSFYQYATYKDRILDknkqlenlglspIKMGL 140 Helicobacter pylori...
15602236  61 SSSLYEVKLGREKfg-----gETHAYSVAYSPEEIGEVVANADK-IIFNSISQLQRFCDHTTH------------LPRGL 122 Pasteurella multocida
15900800  61 ASGLYEAKLAREEfp-----gEVHVFAPAFKDADLEELLEIMDH-IVFNSERQLRKHGPRCREa----------gVSVGL 124 Streptococcus pneum...
15641630  71 SSGPFEVKLGYETfg-----gETHAYSVGYSEEDVKEVIDICDK-MIFNSQSQLAAYRHLVEGk-----------ASLGL 133 Vibrio cholerae
15611089  62 ASGLYEAKLAFEEfggRESHkEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDknkqlenlglspIKMGL 140 Helicobacter pylori...
16330194  72 ASSLWEARLAAEEfg-----kEVHVYAPTYRPDDLPAIIPLASH-ITFNSLGQWHRYRESLKNt----------aVKAGL 135 Synechocystis sp. P...
15616520  65 ASGLYEARLGHEEmg-----kENHIFAPAYREDEIDEIVSICDH-IIFNSFSQLEKFKQRALDa----------gSKVGL 128 Bacillus halodurans
15792828  61 CSGLWEAKFAKEYmd-----kEIHTYSPAFKEDEIGEIASLSHH-IVFNSLAQFHKFQAKTQkn------------sLGL 122 Campylobacter jejuni
15806427  88 ASSLNEAILAKEEmq-----gEVHVYAPAYSDEDFPRILELADH-LVFNSFAQWERFRPQVQAarag-----greLHVGI 156 Deinococcus radiodu...
15644653  62 ASGLYEAKLAFEEfggRESHkEICVYSPAFKEAEMSAILPLATS-IIFNSFYQYATYKDRILDknkqlenlglspIKMGL 140 Helicobacter pylori...
15602236  61 SSSLYEVKLGREKfg-----gETHAYSVAYSPEEIGEVVANADK-IIFNSISQLQRFCDHTTH------------LPRGL 122 Pasteurella multocida
15900800  61 ASGLYEAKLAREEfp-----gEVHVFAPAFKDADLEELLEIMDH-IVFNSERQLRKHGPRCREa----------gVSVGL 124 Streptococcus pneum...
15641630  71 SSGPFEVKLGYETfg-----gETHAYSVGYSEEDVKEVIDICDK-MIFNSQSQLAAYRHLVEGk-----------ASLGL 133 Vibrio cholerae
15611089  62 ASGLYEAKLAFEEfggRESHkEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDknkqlenlglspIKMGL 140 Helicobacter pylori...
16330194  72 ASSLWEARLAAEEfg-----kEVHVYAPTYRPDDLPAIIPLASH-ITFNSLGQWHRYRESLKNt----------aVKAGL 135 Synechocystis sp. P...
15891734 268 RVLTD-------GEGAEWPLSRKFGCVPQMavDVLVYAHQMGLESYGVSFHVGSQMMNLDAWDAALADAKRVFASLakQg 340 Agrobacterium tumef...
15616520 129 RINPEcstqvghEIYDPCSPGSRFGVKQED--VRQ----ELLDGVSGLHFHTLCQQ-NSDDLETTLDAVEEKFGQW--Lp 199 Bacillus halodurans
15792828 123 RCNVEfsl-apkELYNPCGRYSRLGIRAKD--FEN----VDLSTIEGLHFHALCEE-SAGALEAVLKVFEEKFGKW--Ig 192 Campylobacter jejuni
15806427 157 RINPEyae-vetDLYNPAGPFSRLGVTRRE--FRE----DLLDGIDGLHFHTLCEK-DSDTLERTLEVVERNFGEF--Lp 226 Deinococcus radiodu...
15644653 141 RINPLyse-vtpAIYNPCSKVSRLGITPSG--FEKGVKEHGLEGVSGLHFHTHCEQ-NADALCRTLEHVEKHFRPY--Le 214 Helicobacter pylori...
15602236 123 RVNPRvst-ssfLLADPARPHSRLGEWDVA--KIR----DVMPLINGFMFHNNCENEDFGKFCEMLDRIEQEFGEL--Lh 193 Pasteurella multocida
15900800 125 RLNPQcstqgdhALYDPCAPGSRFGVTIDK--IPS----DLLDLVDGLHFHTLCEQ-GADDLQTTLKAVEEQFGPY--Lh 195 Streptococcus pneum...
15641630 134 RINPGvsy-agqDLANPARQFSRLGVQADH--IDE----SVFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRY--Ld 204 Vibrio cholerae
15611089 141 RINPLyse-vtpAIYNPCSKMSRLGITPSG--FEKGVKEHGLEGVSGLHFHTHCEQ-NADALCRTLEHVERHFKPY--Le 214 Helicobacter pylori...
16330194 136 RINPEysp-vqtDLYNPCVSGSRLGVQAAM--LAG----NLPSGITGFLSHNLCES-DHLALEKTLGQIEKLFGEY--Lp 205 Synechocystis sp. P...
15616520 129 RINPEcstqvghEIYDPCSPGSRFGVKQED--VRQ----ELLDGVSGLHFHTLCQQ-NSDDLETTLDAVEEKFGQW--Lp 199 Bacillus halodurans
15792828 123 RCNVEfsl-apkELYNPCGRYSRLGIRAKD--FEN----VDLSTIEGLHFHALCEE-SAGALEAVLKVFEEKFGKW--Ig 192 Campylobacter jejuni
15806427 157 RINPEyae-vetDLYNPAGPFSRLGVTRRE--FRE----DLLDGIDGLHFHTLCEK-DSDTLERTLEVVERNFGEF--Lp 226 Deinococcus radiodu...
15644653 141 RINPLyse-vtpAIYNPCSKVSRLGITPSG--FEKGVKEHGLEGVSGLHFHTHCEQ-NADALCRTLEHVEKHFRPY--Le 214 Helicobacter pylori...
15602236 123 RVNPRvst-ssfLLADPARPHSRLGEWDVA--KIR----DVMPLINGFMFHNNCENEDFGKFCEMLDRIEQEFGEL--Lh 193 Pasteurella multocida
15900800 125 RLNPQcstqgdhALYDPCAPGSRFGVTIDK--IPS----DLLDLVDGLHFHTLCEQ-GADDLQTTLKAVEEQFGPY--Lh 195 Streptococcus pneum...
15641630 134 RINPGvsy-agqDLANPARQFSRLGVQADH--IDE----SVFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRY--Ld 204 Vibrio cholerae
15611089 141 RINPLyse-vtpAIYNPCSKMSRLGITPSG--FEKGVKEHGLEGVSGLHFHTHCEQ-NADALCRTLEHVERHFKPY--Le 214 Helicobacter pylori...
16330194 136 RINPEysp-vqtDLYNPCVSGSRLGVQAAM--LAG----NLPSGITGFLSHNLCES-DHLALEKTLGQIEKLFGEY--Lp 205 Synechocystis sp. P...
15891734 341 iHLQMVNMGGGFPTKYLRdvpAAEEYGQAIDTALRKHFGNqiPKTIIEPGRGMVGNAGVIKAEVVLVSKKSdndnHRWVF 420 Agrobacterium tumef...
15616520 200 -QMEWINFGGGHHITRDD---YDIPRLEACIKRMQDKYG---LEVYLEPGEAIALNAGYLVTTVLDLHKNg----IDIAI 268 Bacillus halodurans
15792828 193 -QMKWVNFGGGHHITKKG---YDVEKLIALCKNFSDKYG---VQVYLEPGEAVGWQTGNLVASVVDIIENe----KQIAI 261 Campylobacter jejuni
15806427 227 -RMNWVNFGGGHLMTREG---YDIPRLIRVVKAFREKHG---VHVILEPGSAFGWQTGWLVSSVLDVVHNv----KDAAL 295 Deinococcus radiodu...
15644653 215 -NMAWVNFGGGHHITKSD---YDVNLLIQTIKDFKERYHN--IEVILEPGEAIGWQCGFLIASVIDIVQNd----QEIAI 284 Helicobacter pylori...
15602236 194 -QVDWVSLGGGIHFTGEN---YPLEAFAERLKQFSAKFG---VQVYLEPGEAAITLSTSLEVTVLDILNNg----KELAI 262 Pasteurella multocida
15900800 196 -EVKWLNMGGGHHITREG---YDVDLLISEIKRIRKTYN---LEIYIEPGEAIALNAGYLATEVLDIVENg----MEILV 264 Streptococcus pneum...
15641630 205 -KLDWVSLGGGVFFTWPG---YDVEKLGAALKAFAERHA---VQLYLEPGEAIITKTTDLVVTVVDIVENg----MKTAI 273 Vibrio cholerae
15611089 215 -NMAWVNFGGGHHITRSD---YDVNLLIQTIKDFKERYHN--TEVILEPGEAIGWQCGFLIASVIDIVQNd----QEIAI 284 Helicobacter pylori...
16330194 206 -QIEWLNLGGGHLMTSQG---YDMDYAIAVIGEFHQRHPH--LRLIMEPGSAIAWQTGFLLSTVEDLIETPe---FTHAM 276 Synechocystis sp. P...
15616520 200 -QMEWINFGGGHHITRDD---YDIPRLEACIKRMQDKYG---LEVYLEPGEAIALNAGYLVTTVLDLHKNg----IDIAI 268 Bacillus halodurans
15792828 193 -QMKWVNFGGGHHITKKG---YDVEKLIALCKNFSDKYG---VQVYLEPGEAVGWQTGNLVASVVDIIENe----KQIAI 261 Campylobacter jejuni
15806427 227 -RMNWVNFGGGHLMTREG---YDIPRLIRVVKAFREKHG---VHVILEPGSAFGWQTGWLVSSVLDVVHNv----KDAAL 295 Deinococcus radiodu...
15644653 215 -NMAWVNFGGGHHITKSD---YDVNLLIQTIKDFKERYHN--IEVILEPGEAIGWQCGFLIASVIDIVQNd----QEIAI 284 Helicobacter pylori...
15602236 194 -QVDWVSLGGGIHFTGEN---YPLEAFAERLKQFSAKFG---VQVYLEPGEAAITLSTSLEVTVLDILNNg----KELAI 262 Pasteurella multocida
15900800 196 -EVKWLNMGGGHHITREG---YDVDLLISEIKRIRKTYN---LEIYIEPGEAIALNAGYLATEVLDIVENg----MEILV 264 Streptococcus pneum...
15641630 205 -KLDWVSLGGGVFFTWPG---YDVEKLGAALKAFAERHA---VQLYLEPGEAIITKTTDLVVTVVDIVENg----MKTAI 273 Vibrio cholerae
15611089 215 -NMAWVNFGGGHHITRSD---YDVNLLIQTIKDFKERYHN--TEVILEPGEAIGWQCGFLIASVIDIVQNd----QEIAI 284 Helicobacter pylori...
16330194 206 -QIEWLNLGGGHLMTSQG---YDMDYAIAVIGEFHQRHPH--LRLIMEPGSAIAWQTGFLLSTVEDLIETPe---FTHAM 276 Synechocystis sp. P...
15891734 421 LDIGKFGGLAETMDEAIRYPi-----------RTERDQDe--MQPCVLAGPTCDSADVLYeknMYPLPVSLTIGDEVLIE 487 Agrobacterium tumef...
15616520 269 LDTSATCHMPDVLEMPYRPPlfgs-------gepGEKP-----FTYRLGGPTCLTGDVIG---DYSFDQPLKSGDRLVFG 333 Bacillus halodurans
15792828 262 LDTSSEAHMPDTIIMPYTSEvlnarilatrenEKISDLKe-sEFSYLLTGNTCLAGDVMG---EYAFDKKLKIGDKIVFL 337 Campylobacter jejuni
15806427 296 LDVSVSAHMPDVLEMPYRPRilgagdpplddhREAQDTGs--GYPYIIGGTTCLAGDVVG---EYVFPHELKVGSRVVFD 370 Deinococcus radiodu...
15644653 285 LDASFSAHMPDCLEMPYRPSifkvsvendeelIEVEKGEnqgAFSYFLGGPTCLAGDFMG---SFSFETPLKRGDKIVFQ 361 Helicobacter pylori...
15602236 263 VDAATEAHMLDLLIYRSEAKllpd---------afqGKGd---YQYMVCGKSCLAGDIFG---EYRFEKPLQIGDRISFC 327 Pasteurella multocida
15900800 265 LDASATCHMPDVLEMPYRPPlrng-------fesQEKA-----HTYRLSSNTCLTGDVIG---DYSFENPVQIGDRLYFQ 329 Streptococcus pneum...
15641630 274 VDSATEAHRLDTLIYKEPASvle-----------asDKGq---HEYVIGSCSCLAGDQFC---VAKFDEPLQVGQKLHIL 336 Vibrio cholerae
15611089 285 LDASFSAHMPDCLEMPYRPSilkvsvendeeiIEVEKGEnqgAFSYFLGGPTCLAGDFMG---SFSFETPLKRGDKIVFQ 361 Helicobacter pylori...
16330194 277 LDVSFTAHMPDCLEMPYRPEvrga------rvpQTGDT------VYRLGGSSCLAGDFLG---DYAFDQPLQVGDRLIFE 341 Synechocystis sp. P...
15616520 269 LDTSATCHMPDVLEMPYRPPlfgs-------gepGEKP-----FTYRLGGPTCLTGDVIG---DYSFDQPLKSGDRLVFG 333 Bacillus halodurans
15792828 262 LDTSSEAHMPDTIIMPYTSEvlnarilatrenEKISDLKe-sEFSYLLTGNTCLAGDVMG---EYAFDKKLKIGDKIVFL 337 Campylobacter jejuni
15806427 296 LDVSVSAHMPDVLEMPYRPRilgagdpplddhREAQDTGs--GYPYIIGGTTCLAGDVVG---EYVFPHELKVGSRVVFD 370 Deinococcus radiodu...
15644653 285 LDASFSAHMPDCLEMPYRPSifkvsvendeelIEVEKGEnqgAFSYFLGGPTCLAGDFMG---SFSFETPLKRGDKIVFQ 361 Helicobacter pylori...
15602236 263 VDAATEAHMLDLLIYRSEAKllpd---------afqGKGd---YQYMVCGKSCLAGDIFG---EYRFEKPLQIGDRISFC 327 Pasteurella multocida
15900800 265 LDASATCHMPDVLEMPYRPPlrng-------fesQEKA-----HTYRLSSNTCLTGDVIG---DYSFENPVQIGDRLYFQ 329 Streptococcus pneum...
15641630 274 VDSATEAHRLDTLIYKEPASvle-----------asDKGq---HEYVIGSCSCLAGDQFC---VAKFDEPLQVGQKLHIL 336 Vibrio cholerae
15611089 285 LDASFSAHMPDCLEMPYRPSilkvsvendeeiIEVEKGEnqgAFSYFLGGPTCLAGDFMG---SFSFETPLKRGDKIVFQ 361 Helicobacter pylori...
16330194 277 LDVSFTAHMPDCLEMPYRPEvrga------rvpQTGDT------VYRLGGSSCLAGDFLG---DYAFDQPLQVGDRLIFE 341 Synechocystis sp. P...
15891734 488 GTGAYTTTySAVAFNGFEPLKAYVI 512 Agrobacterium tumefaciens str. C58 (Cereon)
15616520 334 DMAIYSMV-KTNTFNGMPLPAIATK 357 Bacillus halodurans
15792828 338 DQIHYTIV-KNTTFNGIRLPNLMLL 361 Campylobacter jejuni
15806427 371 DMIHYTMV-KTTFFNGVKHPDIGIL 394 Deinococcus radiodurans
15644653 362 DMLHYTIV-KNNSFNGVPLPSLARL 385 Helicobacter pylori 26695
15602236 328 DAAGYTMV-KKNWFNGVNMPAIAIK 351 Pasteurella multocida
15900800 330 DMAIYSFV-KNNTFNGIGLPSLYLM 353 Streptococcus pneumoniae TIGR4
15641630 337 DSAGYTMV-KLNWFNGLKMPSVYCE 360 Vibrio cholerae
15611089 362 DMLHYTIV-KNNSFNGVPLPSLAKI 385 Helicobacter pylori J99
16330194 342 DMMHYTMV-KTTTFNGVHHPAIGCL 365 Synechocystis sp. PCC 6803
15616520 334 DMAIYSMV-KTNTFNGMPLPAIATK 357 Bacillus halodurans
15792828 338 DQIHYTIV-KNTTFNGIRLPNLMLL 361 Campylobacter jejuni
15806427 371 DMIHYTMV-KTTFFNGVKHPDIGIL 394 Deinococcus radiodurans
15644653 362 DMLHYTIV-KNNSFNGVPLPSLARL 385 Helicobacter pylori 26695
15602236 328 DAAGYTMV-KKNWFNGVNMPAIAIK 351 Pasteurella multocida
15900800 330 DMAIYSFV-KNNTFNGIGLPSLYLM 353 Streptococcus pneumoniae TIGR4
15641630 337 DSAGYTMV-KLNWFNGLKMPSVYCE 360 Vibrio cholerae
15611089 362 DMLHYTIV-KNNSFNGVPLPSLAKI 385 Helicobacter pylori J99
16330194 342 DMMHYTMV-KTTTFNGVHHPAIGCL 365 Synechocystis sp. PCC 6803
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