1NQB,2OI9,1Q0Y,2OL3,1U9K,1NPU,2ZG1


Conserved Protein Domain Family
V-set

?
pfam07686: V-set (this model, PSSM-Id:219514 is obsolete and has been replaced by 336766)
Click on image for an interactive view with Cn3D
Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
?
PSSM-Id: 219514
View PSSM: pfam07686
Aligned: 113 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1NQB_C         1 QVQLQQsg--------------------------------aE-LVKPGASVKLSCKASgytftsywmhwvkQRPGRGLEW 47
gi 160370002   1 MSFPCKfvasfllifnvssk--------gavskeitnaletWgALGQDINLDIPSFQMsddiddikwektsDKKk----- 67
gi 81917809    1 MESSSLllckgllltasfltc------wnapaaaeltielvPpMVAEGGNSVLFVHEMplnvqa--fywykQRDPTKSYE 72
gi 81910450    1 MELASAhlhkgqvpwggllltasllaswspattaevtieavPpQVAEDNNVLLLVHNLplalga--fawykGNTTAIDKE 78
gi 147638519   1 MELASAhlhkgqvpwfgllltasllaswsppttaqvtvmafPlHAAEGNNVILVVYNMmkgvsa--fswhkGSTTSTNAE 78
gi 81910451    1 MELASAhlhkgqvpwvgllltasllaswsppttaevtieavPpQVAEDNNVLLLVHNLplalga--fawykGNPVSTNAE 78
gi 74762116    1 MGPPSAaprgghrpwqgllitaslltfwhppttvqftiealPsSAAEGKDVLLLACNIsetiqa--yywhkGKTAEGSPL 78
gi 156630480   1 MGPPSAcphrecipwqgllltaslltfwnapttawlfiasaPfEVAEGENVHLSVVYLpenlys--ygwykGKTVEPNQL 78
gi 74706123    1 MESPSApphrwcipwqrllltaslltfwnppttakltiestPfNVAEGKEVLLLVHNLpqhlfg--yswykGERVDGNRQ 78
gi 81910541    1 MELASArllrgqipwrgllltaslltywsplttaqvtvdavPpNVVEEKSVLLLAHNLpqefqv--fywykGTTLNPDSE 78
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
1NQB_C        48 IGridPNSGGTKYNEKFKSKATltvdkPsstayMQLSSLTSEDSAVYYCARYDyyg-ssyFDYWGQGTTVTV 118
gi 160370002  68 ----iAQFRKEKETFKEKDTYKlfkngT-----LKIKHLKTDDQDIYKVSIYDtkgknvlEKIFDLKIQERV 130
gi 81917809   73 VArylTPTNESSKMPQHSGRKTvfysgS-----LLIRNVTQADSGVYTLLTFNt-----eMQSELTHVHLEV 134
gi 81910450   79 IArfvPNSNMNFTGQAYSGREIiysngS-----LLFQMITMKDMGVYTLDMTDe-----nYRRTQATVRFHV 140
gi 147638519  79 IVrfvTGTNKTIKGPVHSGRETlysngS-----LLIQRVTMKDTGVYTIEMTDq-----nYRRRVLTGQFHV 140
gi 81910451   79 IVhfvTGTNKTTTGPAHSGRETvysngS-----LLIQRVTVKDTGVYTIEMTDe-----nFRRTEATVQFHV 140
gi 74762116   79 IAgyiTDIQANIPGAAYSGRETvypngS-----LLFQNITLEDAGSYTLRTINa-----sYDSDQATGQLHV 140
gi 156630480  79 IAayvIDTHVRTPGPAYSGRETispsgD-----LHFQNVTLEDTGYYTLQVTYr-----nSQIEQASHHLRV 140
gi 74706123   79 IIgyvIGTQQATPGPAYSGREIiypnaS-----LLIQNIIQNDTGFYTLHVIKs-----dLVNEEATGQFRV 140
gi 81910541   79 IAryiRSDNMSKTGPAYSGRETiysngS-----LFFQNVNKTDERAYTLSVFDq-----qFNPIQTSVQFRV 140
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap