1NQB,2OI9,1Q0Y,2OL3,1U9K,1NPU,2ZG1


Conserved Protein Domain Family
V-set

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pfam07686: V-set (this model, PSSM-Id:219514 is obsolete and has been replaced by 462230)
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Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
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PSSM-Id: 219514
Aligned: 113 rows
Threshold Bit Score: -1
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NQB_C   1 QVQLQQsg--------------------------------aE-LVKPGASVKLSCKASgytftsywmhwvkQRPGRGLEW 47  house mouse
P06729   1 MSFPCKfvasfllifnvssk--------gavskeitnaletWgALGQDINLDIPSFQMsddiddikwektsDKKk----- 67  human
Q9R121   1 MESSSLllckgllltasfltc------wnapaaaeltielvPpMVAEGGNSVLFVHEMplnvqa--fywykQRDPTKSYE 72  Norway rat
Q61350   1 MELASAhlhkgqvpwggllltasllaswspattaevtieavPpQVAEDNNVLLLVHNLplalga--fawykGNTTAIDKE 78  house mouse
Q925P2   1 MELASAhlhkgqvpwfgllltasllaswsppttaqvtvmafPlHAAEGNNVILVVYNMmkgvsa--fswhkGSTTSTNAE 78  house mouse
Q61351   1 MELASAhlhkgqvpwvgllltasllaswsppttaevtieavPpQVAEDNNVLLLVHNLplalga--fawykGNPVSTNAE 78  house mouse
O75871   1 MGPPSAaprgghrpwqgllitaslltfwhppttvqftiealPsSAAEGKDVLLLACNIsetiqa--yywhkGKTAEGSPL 78  human
Q3KPI0   1 MGPPSAcphrecipwqgllltaslltfwnapttawlfiasaPfEVAEGENVHLSVVYLpenlys--ygwykGKTVEPNQL 78  human
P78448   1 MESPSApphrwcipwqrllltaslltfwnppttakltiestPfNVAEGKEVLLLVHNLpqhlfg--yswykGERVDGNRQ 78  human
Q63093   1 MELASArllrgqipwrgllltaslltywsplttaqvtvdavPpNVVEEKSVLLLAHNLpqefqv--fywykGTTLNPDSE 78  Norway rat
1NQB_C  48 IGridPNSGGTKYNEKFKSKATltvdkPsstayMQLSSLTSEDSAVYYCARYDyyg-ssyFDYWGQGTTVTV 118 house mouse
P06729  68 ----iAQFRKEKETFKEKDTYKlfkngT-----LKIKHLKTDDQDIYKVSIYDtkgknvlEKIFDLKIQERV 130 human
Q9R121  73 VArylTPTNESSKMPQHSGRKTvfysgS-----LLIRNVTQADSGVYTLLTFNt-----eMQSELTHVHLEV 134 Norway rat
Q61350  79 IArfvPNSNMNFTGQAYSGREIiysngS-----LLFQMITMKDMGVYTLDMTDe-----nYRRTQATVRFHV 140 house mouse
Q925P2  79 IVrfvTGTNKTIKGPVHSGRETlysngS-----LLIQRVTMKDTGVYTIEMTDq-----nYRRRVLTGQFHV 140 house mouse
Q61351  79 IVhfvTGTNKTTTGPAHSGRETvysngS-----LLIQRVTVKDTGVYTIEMTDe-----nFRRTEATVQFHV 140 house mouse
O75871  79 IAgyiTDIQANIPGAAYSGRETvypngS-----LLFQNITLEDAGSYTLRTINa-----sYDSDQATGQLHV 140 human
Q3KPI0  79 IAayvIDTHVRTPGPAYSGRETispsgD-----LHFQNVTLEDTGYYTLQVTYr-----nSQIEQASHHLRV 140 human
P78448  79 IIgyvIGTQQATPGPAYSGREIiypnaS-----LLIQNIIQNDTGFYTLHVIKs-----dLVNEEATGQFRV 140 human
Q63093  79 IAryiRSDNMSKTGPAYSGRETiysngS-----LFFQNVNKTDERAYTLSVFDq-----qFNPIQTSVQFRV 140 Norway rat
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