Conserved Protein Domain Family
Rib_recp_KP_reg

?
pfam05104: Rib_recp_KP_reg (this model, PSSM-Id:218435 is obsolete and has been replaced by 461548)
Ribosome receptor lysine/proline rich region
This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Statistics
?
PSSM-Id: 218435
Aligned: 6 rows
Threshold Bit Score: -1
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q1LXR3   33 MKETSYEEALAKQRQDSGKTQ-SQRSDKKK--KASEKKTKSKKKEEKQNGNLPESEPEPEPIPEpv-------veNSEPk 102  zebrafish
Q503B8   33 MKETSYEEALAKQRKEQGKTQsSQKSDKKKkdKVAEKKNRSKKKEDKPNGKLLESESTAEVSEV-----------ANEP- 100  zebrafish
Q4RQ25   33 MKETSYEEALAKQRKELGKTQ-SARTDKKKkdKVSEKK--KKKREDKPNGKIPEAETIQEATKTev-------viVAAA- 101  spotted green puffe...
Q99PL5   33 MKETSYEEALANQRKEMAKTH-HQKGEKKKkeKTVEKKGKTKKKEEKPNGKIPEHDLDPNVTi-----------iLKEPv 100  house mouse
Q7ZXD9   22 MKETSYEEALAKQRKESEKNQ-QPKVDKKKkeKLPEKKGKAKKKDEKPNGTIPEHEPNQESTDStkaesarelilEKTP- 99   African clawed frog
Q6GNE7   33 MKETSYEEALAKQRKESEKNQ-QPKFDKKKkeKLPEKKGKAKKKDEKPNGKIPEHEPNQESDEQel-------ilEKTP- 103  African clawed frog
Q1LXR3  103 aVPQVEPEPQPVAVPEpvPEVKPKPVVSEPVpNIVECAAPptvSAVVaplaPSPKEKKKKKVA----KVEPAPVKPVEVP 178  zebrafish
Q503B8  101 -SPPIPLAPEQVAVPAp-KQEASIQKSVQPT-SSQKTTSPalaQKSV----PAVQAQKSAPPApaqkAAPPAPAQKSAPP 173  zebrafish
Q4RQ25  102 -APNVASQPAPVLEVK--PTRAFKPDNVQPKaTAEPTAAP---AKSLp--tPSPKEKKKKKVA----KVEPAPAPRSAEE 169  spotted green puffe...
Q99PL5  101 rVSAVAVAPTSVH-----SSVGHTPIATVPAmPQEKLASS-----------PKDRKKKEKKVA----KVEPAVSSIVNSI 160  house mouse
Q7ZXD9  100 -VPVVPVVPVEVPIV---PVVAPVPKKSASG-SEKAALAP---QKAAp--aPQKAAPAPQKAApapqKAAPAPQKAAPAP 169  African clawed frog
Q6GNE7  104 -------VPVEVPIV---PVVAPIPEKSAPV-SKKSASSP---VKSAp--gPEKASPGSVKSApvpaKAAPVPTKAAPVP 167  African clawed frog
Q1LXR3  179 -IVVAKVEPVVAE 190  zebrafish
Q503B8  174 -ALAQKSAPAPPT 185  zebrafish
Q4RQ25  170 --ATSPQAPVSAQ 180  spotted green pufferfish
Q99PL5  161 qVLASKSAILEAT 173  house mouse
Q7ZXD9  170 ----QKAAPAPQK 178  African clawed frog
Q6GNE7  168 ----AKAAPVPAK 176  African clawed frog
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap