2VIG,2PG0,3SF6,1UKW,1IVH,2EBA,3EOM,2R0M,1WS9,2DVL


Conserved Protein Domain Family
Acyl-CoA_dh_N

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pfam02771: Acyl-CoA_dh_N (this model, PSSM-Id:217220 is obsolete and has been replaced by 426971)
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Acyl-CoA dehydrogenase, N-terminal domain
The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain.
Statistics
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PSSM-Id: 217220
Aligned: 996 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VIG_H         7 PETHQMLLQTCRDFAEKEL-Fp---iAAQVdKEH-L---------FPa---aQ--VKKMG-GlGLLAMDVPEELGGAGld 66  human
Q4KCY6         6 DDTQKKHAAMIAQVCAEQL-Aa---cGNEH--SR-Y---------FTa---rQ--WAICG-EaGLLGLSIPREYGGQGlg 63  Pseudomonas flu...
Q0RL28         6 TEDDRAFGRRFAELLDEKLpadwqgfFAEDr-EAlA---------FT-----RefCRDLG-RaGLLTVSWPAEYGGQGag 69  Frankia alni AC...
Q1QEH1        36 PETVDMILQGMADF-AENVlAp---lYQPAdEEG-Chfen-gvvtTPkgfkeA--YQQFV-DgGWQGISYPEEYGGMNl- 105 Psychrobacter c...
Q2KCR1        35 PDMIEAILGEAAKV-AEEVlFp---vNYSGdQEG-CrrqddasvsTPkgfkeA--YNAYR-EgGWIGLAVPEEFGGQGl- 105 Rhizobium etli ...
Q06319         6 TDIQQDFLKLAHDFGEKKL-Ap---tVTERdHKG-I---------YDk---eL--IDELL-SlGITGAYFEEKYGGSGdd 65  Megasphaera els...
Q2SGM5         7 SPSQNQWLHAFEQFSADEV-Ap---yADEW-DLHeA---------TP-----AsvVKKLAhN-GWLGGLAKEESGGLGfd 66  Hahella chejuen...
Q72MA7         9 KDEDLDFYNTVKEFAKEKI-Lp---sVEQRdEDC-T---------WDn---eL--WKEMG-SiGLLGIPIPEEYGGQGgn 68  Leptospira inte...
YP_001530063   6 TREQLMFKKEVIKFARKEI-Vp---rIEEHeLAG-K---------FDl---eS--FRKMG-EfGILGLHFPEAYGGQGad 65  Desulfococcus o...
YP_001231104   6 TEDQLTFKNSAIEFAEKAL-Nk---gAKEReRNC-E---------FNq---dG--WEKCA-EfGIQRLPIPEEYGGLGvd 65  Geobacter urani...
2VIG_H        67 ---yLAYAIAMEEISR--G--CASTGVi-MSV--NNSLYlgPILKFGSKEQKQAWVTPFTSGD 119 human
Q4KCY6        64 ---aLSTAIAMHAFGL--G--CTDMGLv-FAAaaHQFACamPIVEFATAETKRDVLPKLASGE 118 Pseudomonas fluorescens Pf-5
Q0RL28        70 vwkqTLLRELMTASGEprG--P-QYMNlnYIG--P------LIMKFGTAEQKDRFLPPMARGE 121 Frankia alni ACN14a
Q1QEH1       106 ---pTSLNLIKAEMIG--T--AN-WPWamYPG--LSTGCinTIMQYGTDEQKETYLHKLVEGS 158 Psychrobacter cryohalolentis K5
Q2KCR1       106 ---pYTLHTAVGEYTS--A--AN-MSLmmYPG--LTQGAiaAILVHGTQEQKETYLPKMVDGS 158 Rhizobium etli CFN 42
Q06319        66 ggdvLSYILAVEELAK--Y--DAGVAIt-LSA--TVSLCanPIWQFGTEAQKEKFLVPLVEGT 121 Megasphaera elsdenii
Q2SGM5        67 ---aTTFGLLNMAIGA------GSGSLtgLLNvhSMVLK--TIEDWGTPEQKQQYLTPLVKGE 118 Hahella chejuensis KCTC 2396
Q72MA7        69 ---cFQCCLAQEAFNAgsL--DSGFGLs-WGA--HMIIGslPILFQGTEIQKNKYLPKLVNGE 123 Leptospira interrogans serovar C...
YP_001530063  66 ---vITTVLAGEAMGE--AgvDGGLTLs-YGA--HTFLCtdTIFAHGTEAQRKKYLPKLNSGE 120 Desulfococcus oleovorans Hxd3
YP_001231104  66 ---iLTCVATMEGLGY--G--CRDSGLl-FAInsHIWTCesPILKFGTDYQKKKYLPGLCNGS 120 Geobacter uraniireducens Rf4
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