Conserved Protein Domain Family
Clathrin_propel

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pfam01394: Clathrin_propel (this model, PSSM-Id:216475 is obsolete and has been replaced by 279702)
Clathrin propeller repeat
Clathrin is the scaffold protein of the basket-like coat that surrounds coated vesicles. The soluble assembly unit, a triskelion, contains three heavy chains and three light chains in an extended three-legged structure. Each leg contains one heavy and one light chain. The N-terminus of the heavy chain is known as the globular domain, and is composed of seven repeats which form a beta propeller.
Statistics
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PSSM-Id: 216475
View PSSM: pfam01394
Aligned: 71 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 75102136  154 LPNNQIINYRCDPTEKWLVLIGILhgsperpQLVKGRMQLFSVE 197
gi 461752     58 NPTRRPISADSVIMHPTAKILALKs------GKT---LQIFNIE 92
gi 75169811   60 QPLRRPITADSALMNPNSKILALKaq---vpGTTQDHLQIFNIE 100
gi 116514     60 NPIRRPISADSAIMNPASKVIALKa------GKT---LQIFNIE 94
gi 74619015   62 NVIRRPIKADSAIMHWTRQVIALKaq--------aRTLQIFDLE 97
gi 1705917    60 NVLRRPISADSVILHPKKKIIALKa---------qRQLQVFDLE 94
gi 116515     59 EVTRKNMGGDSAIMHPSQMVISVR--------ANGTIVQIFNLE 94
gi 74862831   59 NSTRKHMKAESVIIHPNDPILALKgt---ikNMNTIFLQVFNIE 99
gi 116512     60 QILRKQMKTDAAIMNPKEPILALK---------IGQVLQLISIE 94
gi 74821984  203 GTFISTNTPTD-----PRSCNLMC-------LAWNNPSTGGKIL 234
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