1X41,2XAF,2XAF,2YQK,1XC5


Conserved Protein Domain Family
Myb_DNA-binding

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pfam00249: Myb_DNA-binding (this model, PSSM-Id:215818 is obsolete and has been replaced by 333957)
Click on image for an interactive view with Cn3D
Myb-like DNA-binding domain
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.
Statistics
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PSSM-Id: 215818
View PSSM: pfam00249
Aligned: 195 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
1X41_A         8 DPSWTAQEEMALLEAVMDCGFGn---WQDVANQMC--TKTKEECEKHYMKYF 54
gi 1729852   409 KRTWSKEEEEALVEGLKEV-GPs---WSKILDLYGpgGKITENLKNRTQVQL 456
gi 1723916   557 EPSFTAVEIRKFEEAVEKFGSE----LRPVCEYVG--TQPMSMIVRFYYNWK 602
2YQK_A         9 EKCWTEDEVKRFVKGLRQYGKN----FFRIRKELl-pNKETGELITFYYYWK 55
gi 74964807  562 SVLWTPDEIYQFQDAIYQSEKD----FDKVAVELP--GKSVKECVQFYYTWK 607
gi 32363488  670 SDNFTDHEHSLFLEGYLIHPKKfgkiSHYMGGLRSp-----EECVLHYYRTK 716
gi 3123302   248 PDIWNEEQHSIFVQQFILHGKKfgkiAEAVPGKNS------KECVLHYYLTK 293
gi 47117817  437 MNVWTDHEKEIFKDKFIQHPKNfgliASYLERKSV------PDCVLYYYLTK 482
1XC5_A        20 MNMWSEQEKETFREKFMQHPKN----FGLIASFLE--RKTVAECVLYYYLTK 65
gi 47117817  625 TSRWTEEEMEVAKKGLVEHGRNwaaiAKMVGTKSE------AQCKNFYFNYK 670
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