2Z69,1O5L,2PQQ,3IWZ,1CX4,1CX4


Conserved Protein Domain Family
cNMP_binding

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pfam00027: cNMP_binding (this model, PSSM-Id:215664 is obsolete and has been replaced by 425428)
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Cyclic nucleotide-binding domain
Statistics
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PSSM-Id: 215664
Aligned: 348 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2Z69_C   37 LVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKi-LEVTNERNTFAEAMMFMDTpNYVATAQA--VVPSQLF 112  Pseudomonas aeruginosa
O43386  134 EVVEQAGAIILEDGQE-LDSWYVILNGTVEISHPDGKVE------NLFMGNSFGITPTLDKQ--YMHGIVRtkVDDCQFV 204  human
P34578   33 PDSIQQGVVLFEKDEP-TEYWYLLLSGEVQLYSKTYTGDFNh-LKTLRCGALFGDLSTLTHS----CSCLV--TRPAQLI 104  Caenorhabditis elegans
O96385  475 EKTFAPEEVIIKKDEL-PNQLYIVLAGQVKSLILEKSIK------RYQQGNLLCEREFFYQD-VMQYNIVA--SSFVQVA 544  Paramecium tetraurelia
Q6W9L5  225 VIKLQPGDEVVKTQQF-ADHLIFLLSGELTLLGHNSRQPIV--LKQLTGGTVIGEQEFTEQG-YYDYIIIS--QGYSKIA 298  Paramecium tetraurelia
Q6BGA9  480 LISLLTGDVVYKQGDLsEDSLYFIHKGEVKQTELQTKTTL----KTLQKNQYLGIYSFFTGFcPKETAICN---SPTEIY 552  Paramecium tetraurelia
Q7XB48  758 EYMKLQGSVIYREDMK-SDGIWLITNGVVKWSKKAVGGQRLr-QPTFSFGSTLGLYEVLTGK-PYLCDVVA--DSVVHCF 832  Physcomitrella patens
Q87IF0   33 TRYFDAGEAILRQGEQ-LQYLYIVPVGRVSMSILAANGRRFqlGEANCDYHIYGEMEYFTQT-PCQWNVVA--DEHMQVD 108  Vibrio parahaemolyt...
Q8EDM6   33 VKMLKKGTHLMTQGEA-ITSLVLVKQGRVSLGHTAKNGRCFqlGTIDCDSQLFGEMEFFTQY-HCQLDIIA--NEPLEIM 108  Shewanella oneidensis
1O5L_A   24 VIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENGKTLe-IDEIKPVQIIASGFIFSSEpRFPVNVVA--GENSKIL 99   Thermotoga maritima
2Z69_C  113 RFSNKAYLRQLQDNTP 128  Pseudomonas aeruginosa
O43386  205 CIAQQDYWRILNHVEK 220  human
P34578  105 RIAQNHFLSVYNKHGD 120  Caenorhabditis elegans
O96385  545 YLNLSEFQSIIQNHRS 560  Paramecium tetraurelia
Q6W9L5  299 AISRASFYEILQYDRQ 314  Paramecium tetraurelia
Q6BGA9  553 KINRKKFLEIIRSNQK 568  Paramecium tetraurelia
Q7XB48  833 FVERSRILFIQKERAD 848  Physcomitrella patens
Q87IF0  109 VICIQKLTEALQQHPE 124  Vibrio parahaemolyticus
Q8EDM6  109 VISAEKLQHSLGQHPQ 124  Shewanella oneidensis
1O5L_A  100 SIPKEVFLDLLMKDRE 115  Thermotoga maritima
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