1RXV,1A76,3Q8M,1MC8


Conserved Protein Domain Family
XPGN

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smart00485: XPGN 
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Xeroderma pigmentosum G N-region
domain in nucleases
Statistics
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PSSM-Id: 214690
View PSSM: smart00485
Aligned: 31 rows
Threshold Bit Score: 86.9031
Threshold Setting Gi: 50237510
Created: 13-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1RXV_A         1 MGAD-IGDLFER------EEVELEYFS--GKKIAVDAFNTLYQFisIIRQPDGTP--LKDsqgritshLSGILYRVSNMV 69
gi 74765853    1 MGITgLIPFVGKa----sSQLHLKDIR--GSTVAVDTYCWLHKGvfGCAEKLARG--EDTdv-----yIQYCLKYVNMLL 67
gi 74960272    1 MGISgLLPFVKNa----cRKGNILELR--GKSVAIDVSCLLHRGltGCMDKIHMG--EETqs-----yVNYVNKYVKELL 67
gi 148227124   1 MGIQgLLQFLKEa----sEPVHVKKYK--GKTVAVDTYCWLHKGafACAEKLAKG--EPTdq-----yVQFCMKLVHMLL 67
gi 19112842    1 MGIKgLLGLLKPm----qKSSHVEEFS--GKTLGVDGYVWLHKAvfTCAHELAFN--KETdk-----yLKYAIHQALMLQ 67
gi 323303082   1 MGIQgLLPQLKPi----qNPVSLRRYE--GEVLAIDGYAWLHRAacSCAYELAMG--KPTdk-----yLQFFIKRFSLLK 67
gi 256271259   1 MGIPgLLPQLKRi----qKQVSLKKYM--YQTLAIDGYAWLHRAscACAFELVMN--KPTnk-----yLQFFIKRLQLLK 67
gi 3184284     1 MGFTsLYSLYGKsk--vlKSISFSALN--SKTLAIDASMWLYRGalNNARKFLEEptTPNse-----hIMFVIKKVKQFI 71
gi 19113794    1 MGVHgLLPIIRKvasegiRWLQPEFFSkyYPVLAVDGNLLLYRFfrSPNTPLHTN--YQHv------lWALKLSRYCR-- 70
gi 50237510    1 MGVKnLNLFLRSvgv-teEWLPYSNFA--GKRVAIDAAYLMHRFk-AANGNLWDM--LLNn-----------FVVAC-VI 62
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
1RXV_A        70 EVGIRPVFVFDGEPP-EFKK-------AEIEERKKRRAEA 101
gi 74765853   68 SYDIKPILVFDGQHL-PAKA-------LTEKRRRDSRKQS 99
gi 74960272   68 GMGCHVVMVFDGRPL-PAKK-------GTNEERRELREKR 99
gi 148227124  68 SFGVKPILVFDGCTL-PSKK-------DVEKARREKRQTN 99
gi 19112842   68 YYGVKPLIVFDGGPL-PCKA-------STEQKRKERRQEA 99
gi 323303082  68 TFKVEPYLVFDGDAI-PVKK-------STESKRRDKRKEN 99
gi 256271259  68 RLKIKPYIVFDGDSL-FVKN-------HTETRRRKKRLEN 99
gi 3184284    72 DRNVNPILVFDGHRL-PIKSprnpiktLEYAKDLDASAQl 110
gi 19113794   71 KLKTSPIVVFDNLKPnDFKA-------EEHEKRSLISSQi 103
gi 50237510   63 NNKIDMTFVFDGIAP-IEKT-------DElaarasrraaa 94
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