1ZVO,1SM3,1DN0,1UZ8,1MCP,2FL5,1FDL,2IG2,1NDM,2JEL,3QOS,1ACY,3KDM,3PP3,2AK4,1I85,1YJD,1NEU


Conserved Protein Domain Family
IGv

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smart00406: IGv 
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Immunoglobulin V-Type
Statistics
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PSSM-Id: 214650
View PSSM: smart00406
Aligned: 86 rows
Threshold Bit Score: 28.8873
Threshold Setting Gi: 119592981
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1ZVO_C        17 TLSLTCIVSGGPIrr--tgYYWGWIRQPp---gKGLEWIGGvy-ytGSIY-YNp-SLRGRVTISVDt----sRNQFSLNL 84
gi 6678347    33 NLRLDCRHENNTKdn--siQHEFSLTRE-----KRKHVLSG-----TLGIpEH--TYRSRVTLSNQ------PYIKVLTL 92
gi 1127761    29 TAYLPCPFTKAQNisl-seLVVFWQDQQk---lVLYEHYLG-----TEKL-D---SVNAKYLGRTSf----dRNNWTLRL 91
gi 6226562   301 SGIYKCSLLDNDVmestqfVTVSFLDVsltptgKVLKNVGEn---lIVSL-DKnaSSEAKVTWTKDn----rKLDKLPDF 372
gi 54695750   49 NATFTCSFSNTSEs-----fVLNWYRMSp---sNQTDKLAAfp--eDRSQ-PGq-DCRFRVTQLPNg------RDFHMSV 110
gi 332634944  29 TADLPCQFANSQNqsl-seLVVFWQDQEn---lVLNEVYLGke--kFDSV-HS--KYMGRTSFDSDs--------WTLRL 91
gi 1246079     9 DAELTCGFSPNASse---yMELLWFRQT-----RSTAVLLYrdgqeQEGQ-QMt-EYRGRATLATAgl---lDGRATLLI 75
gi 194665370 101 ELVIPCNVSDYDGps---eQNFDWSFSAsg--sSFVELASTw----EAGF-PAq-QYRERLQRGDIllrrtaNDAVELHI 169
gi 13928702   46 TASLRCSLKTTQEp-----LIVTWQKKKa----VGPENMVTys-kaHGVV-IQp-TYKDRINITELg-----LLNTSITF 108
1I85_A        11 TADLPCQFANSQNqsl-seLVVFWQDQEn---lVLNEVYLGke-kfDSV---Hs-KYMGRTSFDSD--------SWTLRL 73
                         90
                 ....*....|....*
1ZVO_C        85 RSMSAADTAMYYCAR 99
gi 6678347    93 ANFTTKDEGDYFCEL 107
gi 1127761    92 HNVQIKDMGSYDCFI 106
gi 6226562   373 SKLTYSDAGLYVCDV 387
gi 54695750  111 VRARRNDSGTYLCGA 125
gi 332634944  92 HNLQIKDKGLYQCII 106
gi 1246079    76 RDVRFSDQGEYRCLF 90
gi 194665370 170 KNVQHSDQGHYKCST 184
gi 13928702  109 WNTTLDDEGCYMCLF 123
1I85_A        74 HNLQIKDKGLYQCii 88
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