1U5M


Conserved Protein Domain Family
VWC

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smart00214: VWC 
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von Willebrand factor (vWF) type C domain
Statistics
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PSSM-Id: 214564
View PSSM: smart00214
Aligned: 39 rows
Threshold Bit Score: 39.4216
Threshold Setting Gi: 9506825
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1U5M_A          10 CVQ-DGQRYNDKDVWK----PEpCR-ICVCDTGt--------VLCDDIICEDVK----DCLSPE-------IPFGECCP- 63
gi 164518956 13069 CHGpLGEEKSPGDVWT----AN-CH-KCTCTEAk-------tVDCKPKECPSPP----TCKTGErli--kfKANDTCCE- 13128
gi 297458416  1816 CYGpLGEKKSPGDIWT----AN-CH-KCTCTDAe-------tVDCKLKECPSPP----TCKPEErlv--kfKDNDTCCE- 1875
gi 291084735   230 CVD-IKDNVVDEGFYFtpkgDDpCL-SCTCHGGe-------pEMCVAALCERPQ----GCQQYR-------KDPKECCKf 289
gi 957315       11 CIY-KGSIYRQGETWE----DG-CDfKCTCVDEtr-----gmYQCTAR-CKTYTslpsVCKMYD--------VPGECCAe 70
gi 1296460     246 CEQ-DGRVHRVGERWR----AGpCR-VCQCLHDg-------sARCSPY-CPLG-----SCPQDWvl---veGVGESCCH- 302
gi 116284392  4926 CVHgNAEYQPGSPVYS----SK-CQ-DCVCTDKvdnntllnvIACTHVPCNTS------CSPGFel----mEAPGECCK- 4988
gi 293344486  2183 CVHeNAEYQPGSPVYS----NK-CQ-DCVCTDSmdnstqlnvISCTHVPCNIS------CSSGFel----vEVPGECCK- 2245
gi 160370004  4654 CLGpHGEPVKVGHTVG----MD-CQ-ECTCEAAtw------tLTCRPKLCPLPP----ACPLPGfvpvpaaPQAGQCCPq 4717
gi 340361     1692 CVH-RSTIYPVGQFWE----EG-CD-VCTCTDMedavmglrvAQCSQKPCEDS------CRSGFty----vLHEGECCG- 1753

                   ...
1U5M_A          64 -IC 65
gi 164518956 13129 -Ig 13130
gi 297458416  1876 -Ia 1877
gi 291084735   290 -MC 291
gi 957315       71 vRC 73
gi 1296460     303 --C 303
gi 116284392  4989 -KC 4990
gi 293344486  2246 -KC 2247
gi 160370004  4718 ySC 4720
gi 340361     1754 -RC 1755
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