1RMJ,2DSR,1ICF,2H7T


Conserved Protein Domain Family
TY

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smart00211: TY 
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Thyroglobulin type I repeats.
The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases and binding partners of heparin.
Statistics
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PSSM-Id: 214561
View PSSM: smart00211
Aligned: 45 rows
Threshold Bit Score: 39.2831
Threshold Setting Gi: 74962180
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
1RMJ_A         54 VPNCDHRGFYRKRQCRSSQ-GQrrgpCWCVD-RMGKSLPGSPdg--nGSS-SCPT 103
gi 74766138   288 IPQCTQDGYYAVEQCYEGNgTF----CWCADtETGAVKPDTEvh--gARA-DCER 335
gi 74962180    40 GLKCNENGYYETVQCNSES-------CYCVTpHTALVAYDTRtnnpkTAP-KCGT 86
gi 27806935   683 VPACTSKGNFLPVQCFNS---E----CYCVD-TEGQPIPGTRsa--lGEPkKCPS 727
gi 1351040    127 IPQCDEKGNYQPQQCHGST-GH----CWCVN-AMGEKISGTNtppgqTRA-TCER 174
gi 17538590  1165 IPDCDLNGNFDEVQSHFGL-------MWCVG-RSGQEIAGTKst---rVP-NCDD 1207
gi 3319330   1519 GLQCDQNGQYQASQKNRDS-GE----VFCVD-SEGRKLQWLQteaglSES-QCLM 1566
gi 296480701 1522 GLQCDQDSQYRASQRDRTS-GK----AFCVD-GEGRRLPWTEaeaplVDA-QCLV 1569
gi 27806935   879 YPGPYSD-FSAPLAHFDLRs------CWCVD-EAGQKLEGTRne-pnKVP-ACPG 923
gi 61365477    96 DPDCDESGLFKAKQCNGTS--T----CWCVNtAGVRRTDKDT------EI-TCSE 137
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