Conserved Protein Domain Family
GH38N_AMII_Man2C1

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cd10813: GH38N_AMII_Man2C1 
N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
The subfamily corresponds to cytosolic alpha-mannosidase Man2C1 (also known as ER-mannosidase II or neutral/cytosolic mannosidase), mainly found in various vertebrates, and similar proteins. Man2C1 plays an essential role in the catabolism of cytosolic free oligomannosides derived from dolichol intermediates and the degradation of newly synthesized glycoproteins in ER or cytosol. It can catalyze the cleavage of alpha 1,2-, alpha 1,3-, and alpha 1,6-linked mannose residues. Man2C1 is a cobalt-dependent enzyme belonging to alpha-mannosidase class II. It has a neutral pH optimum and is strongly inhitibed by furanose analogs swainsonine (SW) and 1,4-dideoxy-1,4-imino-D-mannitol (DIM), moderately by deoxymannojirimycin (DMM), but not by kifunensine (KIF). DMM and KIF, both pyranose analogs, are normally known to inhibit class I alpha-mannosidase.
Statistics
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PSSM-Id: 212124
Aligned: 11 rows
Threshold Bit Score: 484.203
Created: 31-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
active sitecatalytic site
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 # #  #                                                                  
Q9NTJ4        252 TIHATGHCHIDTAWLWPFkETVRKCARSWVTALQLMERNPeFIFACSQA-----------------------QQLEWVKS 308  human
XP_002119529  260 HVHAMGHCHIDCAWLWPYsETRRKCARSWVSVLNIMKRYPdFTFVCSQA-----------------------QQFAWVKS 316  Ciona intesti...
XP_788499     250 TIHAIANAHIDSAWLWPYaETKRKVARTWSNVLSLAEDYPqLNFAFSQA-----------------------QQFQWVKT 306  purple urchin
NP_001084900  268 IIHAMGHCHIDSAWLWPYeETIRKCARSWISAVQLMAKYPdFKFTCSQA-----------------------QQLEWVKN 324  African clawe...
XP_001625429  255 QVYAVGNCHIDCAWLWPAaETVRKCGRSFATAVQLMKKYPdFKFACSQA-----------------------QQLEWVKI 311  starlet sea a...
NP_001073183  247 TIHAMGHCHIDSAWLWPYeETIRKCARSWVTVIRLMEHNPeLTFACSQA-----------------------QQFEWVRS 303  chicken
CAF98334      238 TVHAMGHCHIDSAWLWPYeETIRKCGRSWVTVVGLLEKNPdFVFVCSQVtshtsvciqspvcffscvcsdqaQQLQWVKS 317  spotted green...
EFX64848      263 IIDAMGHCHIDTAWLWTYdETIRKCARSWSSVIALMKDYPeMTFVCSQA-----------------------QQFSWVKQ 319  common water ...
EFV60165      295 TVQAVGNCHIDTAWLWPYaETKRKCARAWSSTLRLMEEYPdLTFACSQA-----------------------LQMRWVQK 351  Trichinella s...
EFW39762      274 SISAIGHCHIDTAWLWPYdETIRKCARSFATVDRYMDDYPeLKFACSQA-----------------------QQLDWIRL 330  Capsaspora ow...
ADY40800      263 TLYAIGNCHIDSAWLWRYeETKRKCARSWATTLSLMENYTaMTFAVSQA-----------------------QQLVWLRE 319  pig roundworm
Feature 1                                                                        # #              
Q9NTJ4        309 RYPgLYSRIQEFACRGQFVPVGGTWvemDGNLPSGEAMVRQFLQGQNFFLQEFGkMCSEFWLPDTFGYSAQLPQIMHGCG 388  human
XP_002119529  317 DYPqLFEEIKSQVKNGRFIPVGGTWvemDGNLPSGESMMMQFFYGQKFFREEFGiTCDEFWLPDTFGYSGNFPQIMKESG 396  Ciona intesti...
XP_788499     307 DYPsLYKKIQEMARRGRFIPVGGCWvemDGNLPSGESFVRQLLYGQRFFKEEFGsYCTEYWLPDTFGYSAQLPQILAGGG 386  purple urchin
NP_001084900  325 WYPrLYEQIKQYVKLGQFIPVGGTWvemDGNLPSGESMVRQFLQGQQFFLKEFGkMCSEFWLPDTFGYSAQLPQLMNGCG 404  African clawe...
XP_001625429  312 HYPgLYEEIKKFVANGQFIPVGATWvemDGNIPSGESFIRQFVVGQQFFKEEFGmMCKEFWLPDTFGYSAQLPQIITGCG 391  starlet sea a...
NP_001073183  304 WYPgLYAKIQDYVAKGQFIPVGGTWvemDGNLPSGESMVRQFLQGQRFFQEQFGrICSEFWLPDTFGYSAQLPQLMCGCG 383  chicken
CAF98334      318 WYPgLFSQIQHYVKKGRFVPVGGVWvemDGNLPSGESMVRQFLEGQRFFNQEFGiHCKEFWLPDTFGYSAQLPQIMQGCG 397  spotted green...
EFX64848      320 YYPsLFEEMKHFISLGRFIPVGGTWvemDGNIPSGESFIRQFLYGQRFFLKEFGiRSQEFWLPDTFGYSAQTPQILKHVG 399  common water ...
EFV60165      352 FYPdLFAQIVKRVHEGRFVLVGGAWvehDGCLPSGESFVRQLLYGQSYFKENFGvTCTEAWLPDTFGYSGQLPQIFASAG 431  Trichinella s...
EFW39762      331 YYPgLFSRLRERVKQGRFIPVGGAW---DGNIPSGEAMARQFLYGQTFFQREFGiTCKEFWLPDTFGYSAQLPQLMRQAG 407  Capsaspora ow...
ADY40800      320 QYPtLYEDMQDRALDGKLVGVGGSWvemDGNMPNGESMIRQMLYGQREFKKMFGnYSNVFWLPDTFGYSAQLPQIMKHCG 399  pig roundworm
Feature 1                #                                                                  #     
Q9NTJ4        389 IRRFLTQKLSWNlvNSFPHHTFFWEGLDGSRVLVHFPPgdsYGMQGSVEEVLKTVANNRDkGRANHSAFLFGFGDGGGGP 468  human
XP_002119529  397 IDCFLTQKLSWNlvNKFPHHTFYWQGIDGSRQLTHFPPgesYGMSMKAEELMKTLTNHKDkGRSDSSIFLFGFGDGGGGP 476  Ciona intesti...
XP_788499     387 MKRFVTQKMSWClvNKFPHSTFWWQGIDGTKCLAHFPPtdtYHARVKVEECLKNASNHQDkGRSDHSLMLYGFGDGGGGP 466  purple urchin
NP_001084900  405 IHRFLTQKLSWSliNAFPHHTFYWEGIDGSKVLTHFPPgdsYGMMGTVEEVLKTVKNNRDkGRVNDSIFLFGFGDGGGGP 484  African clawe...
XP_001625429  392 IKFFLTQKLSWSliNKFPFSSFFWQGIDGSKCLTHFPPadtYESRGDAKDVLKTSSNLKDkGRVHGSMLLYGHGDGGGGP 471  starlet sea a...
NP_001073183  384 IKRFLTQKLSWNlvNTFPHHTFFWEGIDGSRVLTHFPPgdsYGMHGRVEEMLKTVKNNKDkGRVNHSAVLFGFGDGGGGP 463  chicken
CAF98334      398 ISSFMTQKLSWNlvNTFPHNTFFWEGLDGSKVLTHFPPgdsYEMKGKVNDLVKTVRNNRDkGRVNHSALLFGFGDGGGGP 477  spotted green...
EFX64848      400 ISRFLTQKLSWSlvNKFPHHNFLWEGIDGSTVIVHFPPgdsYEANCKVSEALKTERNLLDkGRVTRSVMLYGFGDGGGGP 479  common water ...
EFV60165      432 MRRFVTQKLSWNvvNKFPNSTFLWEGIDGTSVVAHLPPgnsYVMENTVSDVFKTMANFQDkGRSETALLLFGKGDGGGGP 511  Trichinella s...
EFW39762      408 ISRFVTQKLSWNliNKFPHNTFHWEGIDGSRVLTHFPPadtYNSQVLPDEVMKSITNFKDhGRSRESMMLFGHGDGGGGP 487  Capsaspora ow...
ADY40800      400 MCYFVTQKMSWSliNQFPHHSFRWMGIDGTRVLTHFPPh-hYVAQITVKECLESVQKFTDrGRSNIAMMLYGYGDGGGGP 478  pig roundworm
Feature 1                                            
Q9NTJ4        469 TQTMLDRLKRLsnTDGLPRVQLssPRQLFSALESD 503  human
XP_002119529  477 NDFMLERFERMrdTAGLPRVEMstPKKFFQEVKTK 511  Ciona intestinalis
XP_788499     467 TNDMLERMQRLedVDGIPRVKPstPNEFFSAIEKD 501  purple urchin
NP_001084900  485 TENMVGSLKRMndTDGLPRVHLstPDRFFSTVEAD 519  African clawed frog
XP_001625429  472 SEDMIEMLKRMedVDGCPRVKLssPHEFFTAVAKR 506  starlet sea anemone
NP_001073183  464 TQNMLDRMKRMsdTDGLPRVQIstPDCFFSALEKE 498  chicken
CAF98334      478 TQLMLDRLHRLqdTDGLPRVQMssPDKFFSHLRTN 512  spotted green pufferfish
EFX64848      480 HKPMLDRMERLkdVDGVPKFENstPNKFFENLEAE 514  common water flea
EFV60165      512 EREMCERLVRSqrLPGCPAMKPttPASFFEDVEAT 546  Trichinella spiralis
EFW39762      488 QMVMLERMRRMqdCDGVPKINVrsPDEFFTRVEAE 522  Capsaspora owczarzaki ATCC 30864
ADY40800      479 DKNMLERAQRLvdCDGVPKILHatPNEFFAELEKD 513  pig roundworm

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