1TPZ,1TQ4


Conserved Protein Domain Family
p47_IIGP_like

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cd04104: p47_IIGP_like 
Click on image for an interactive view with Cn3D
p47 GTPase family includes IGTP, TGTP/Mg21, IRG-47, GTPI, LRG-47, and IIGP1
The p47 GTPase family consists of several highly homologous proteins, including IGTP, TGTP/Mg21, IRG-47, GTPI, LRG-47, and IIGP1. They are found in higher eukaryotes where they play a role in immune resistance against intracellular pathogens. p47 proteins exist at low resting levels in mouse cells, but are strongly induced by Type II interferon (IFN-gamma). ITGP is critical for resistance to Toxoplasma gondii infection and in involved in inhibition of Coxsackievirus-B3-induced apoptosis. TGTP was shown to limit vesicular stomatitis virus (VSV) infection of fibroblasts in vitro. IRG-47 is involved in resistance to T. gondii infection. LRG-47 has been implicated in resistance to T. gondii, Listeria monocytogenes, Leishmania, and mycobacterial infections. IIGP1 has been shown to localize to the ER and to the Golgi membranes in IFN-induced cells and inflamed tissues. In macrophages, IIGP1 interacts with hook3, a microtubule binding protein that participates in the organization of the cis-Golgi compartment.
Statistics
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PSSM-Id: 206690
Aligned: 15 rows
Threshold Bit Score: 319.657
Created: 4-Oct-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ######                 ##                                             
1TPZ_A     69 VLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTG-VVEVTMERHPYKHPn-IPNVVFWDLPGIGSTNFPPDTYLEKMKF 146 house mouse
NP_032352  76 PVSIFVTGDSGNGMSSFINALRVIGHDEDASAPTG-VVRTTKTRTEYSSSh-FPNVVLWDLPGLGATAQTVEDYVEEMKF 153 house mouse
NP_062558  54 RLEVGVTGESGAGKSSLINALRGLEAEDPGAALTG-VMETTMQPSPYPHPq-FPDVTLWDLPGAGSPGCPADKYLKQVDF 131 human
BAC40277   84 RVKIAVTGDSGNGMSSFINALRFIGHEEEESAPTG-VVRTTKKPACYSSDshFPYVELWDLPGLGATAQSVESYLEEMQI 162 house mouse
AAH66660   74 VLDVAVIGESGTGKSSFINAIRGLGHEEAESADVG-TVETTMYKTPYQHPk-YTNVIFWDLPGTGTPNFHTDTYLDRVGF 151 Norway rat
CAF90150   37 PLKIGITGESGSGKSSFVNAFRGVDHRDEKEAAPVgVVETTAEVKEYPHPd-YPNVILWDLPGISSTKFPADDYLSRVGF 115 Tetraodon nigrovir...
AAH85259   56 PLHIAVTGETGAGKSTFINTLRGVGHEEKGAAPTG-AIETTMKRTPYPHPk-LPNVTIWDLPGIGTTNFTPQNYLTEMKF 133 house mouse
CAI24817  481 PLNIAVTGETGTGKSSFINALRGVRDEEEGAAPTG-VVETTMKRTPYPHPk-LPNVTIWDLPGIGSTTFPPQNYLTEMKF 558 house mouse
CAI24817   70 PLNIAVMGETGAGKSSLINALQGVGDDEEGAAASTgVVHTTTERTPYTYTk-FPSVTLWDLPGIGSTAFQPHDYLKKIEF 148 house mouse
CAI35117   76 PVSIFVTGDSGNGMSSFINALRVIGHDEDASAPTG-VVRTTKTRTEYSSSh-FPNVVLWDLPGLGATAQTVEDYVEEMKF 153 house mouse
Feature 1                                          # ##                                       
1TPZ_A    147 YEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVRTKVDSDITNEADGKPqtfdkeKVLQDIRLNCVNTFrengiAEPP 226 house mouse
NP_032352 154 STCDLFIIIASEQFSSNHVKLSKIIQSMGKRFYIVWTKLDRDLSTSVLSEVrl---lQNIQENIRENLQKEkv--kYPPV 228 house mouse
NP_062558 132 SRYDFFLLVSPRRCGAVETRLAAEILCQGKKFYFVRTKVDEDLAATRTQRPsgfreaAVLQEIRDHCAERLreagvADPR 211 human
BAC40277  163 STFDLIIIVASEQFSSNHVKLAITMQRMRKRFYVVWTKLDRDLSTSTFPEP------QLLQSIQRNIRENLqqaqvRDPP 236 house mouse
AAH66660  152 ANYDFFIIISSSRFSVNDALLAQKIKDAGKKFYFVRTKVDSDLYSEERTRPrtfrkeQVLQRIRDYCLSNLtdigvSEPR 231 Norway rat
CAF90150  116 EKFDFFIIISDTHFRENDVKLAKEIQKMGKKFYFVRSKVDNDLLNAQRRQRdfd-peQTLSHIRDDCKQGLln-agLQAQ 193 Tetraodon nigrovir...
AAH85259  134 GEYDFFIIISATRFKENDAQLAKAIAQMGMNFYFVRTKIDSDLDNEQKFKPksfnkeEVLKNIKDYCSNHLqesldSEPP 213 house mouse
CAI24817  559 GEYDFFIIISATRFKEIDAHLAKTIEKMNTKFYFVRTKIDQDVSNEQRSKPrsfnrdSVLKKIRDDCSGHLqkalsSQPP 638 house mouse
CAI24817  149 EEYDFFIIVSSGRFKHNDAELAKAIVQMNRSFYFVRTHTDLDLMVVKRSNPrrfnreNTLKQIRHTISSMLkevthQEPP 228 house mouse
CAI35117  154 STCDLFIIIASEQFSSNHVKLSKIIQSMGKRFYIVWTKLDRDLSTSVLSEV------RLLQNIQENIRENLqkekvKYPP 227 house mouse
Feature 1         ###                                                        
1TPZ_A    227 IFLLSNKnVCHYDFPVLMDKLISDLPi------------------------YKRHNFMVSLPN 265 house mouse
NP_032352 229 FLVSSLD-PLLYDFPKLRDTLHKDLSnircceplktlygtyekivgdkvavWKQRIANESLKN 290 house mouse
NP_062558 212 IFLVSNLsPARYDFPTLVSTWEHDLPs------------------------HRRHAGLLSLPD 250 human
BAC40277  237 LFLISCFsPSFHDFPELRNTLQKDIFsi----------------------rYRDPLEIISQVC 277 house mouse
AAH66660  232 IFLISNFdLDAFDFPKLEETLLKELPg------------------------HKRHMFALLLPN 270 Norway rat
CAF90150  194 VFVLSNFyPQRYDFHRLHETLERELPe------------------------HQRDVLLVAMPN 232 Tetraodon nigroviridis
AAH85259  214 VFLVSNVdISKYDFPKLETKLLQDLPa------------------------HKRHVFSLSLQS 252 house mouse
CAI24817  639 VFLVSNFdVSDFDFPKLETTLLRELPs------------------------HKRHLFMMSLHS 677 house mouse
CAI24817  229 VFLVSNFdVSDFDFPKLESTLLSQLPa------------------------YKHHMFMLTLPI 267 house mouse
CAI35117  228 VFLVSSLdPLLYDFPKLRDTLHKDLSnircceplkt-----lygtyekivgDKVAVWKQRIAN 285 house mouse

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