Conserved Protein Domain Family
LRR_4

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pfam12799: LRR_4 (this model, PSSM-Id:205079 is obsolete and has been replaced by 315469)
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Leucine Rich repeats (2 copies)
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Statistics
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PSSM-Id: 205079
View PSSM: pfam12799
Aligned: 575 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

pfam12799 is not assigned to any domain superfamily.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
2OMZ_A        286 TALTNLELNENQLE-DISP---------I-SNLKNLTYLTLYFNNIS-DI-SPVSS 328
gi 108935844  244 SALKCLNISNNNIS-EIPSr-------mF-KDVPHLEFFGMSRNNLS-LV-PHHNQ 288
gi 123058966   77 SKVTKISAINNNIV-SIPS---------L-LPMTNLETVHIYNNKLA-TM-PDFAG 119
gi 39968605  1531 DGLQILRARNNNIE-SIDFe--------H-CNMASLFELDLADNDVK-TV-SHIEK 1574
gi 219119993  427 ESVRSIRLGNNRLQgSIPSt--------F-NRMYQLRDLGLDNNYITaDI-PDLEG 472
gi 298483709  618 VKLMKVYLDNNKIK-EIPGvedgnglkyF-FGWNDVETLSCTNNQLT-EV-PNIFN 669
gi 123467002  335 DKLSFINFAKNSLT-DIPRs--------L-LNYKNMSQVHFQSNKIK-KFpEEFKS 379
gi 254567988   67 PRLKTILIAKNSVR-SIQSn--------LaQNVPNVESIVLINNKIK-SL-TSLEP 111
gi 170055321  135 PKLEKFYINNNRLT-DISFe--------H-WNTTSLYTIHLHENQLQiAL-SLPGK 179
gi 123447564  174 ASLKHFTAKGNMIY-DVDN---------I-ASNT-LADLDLTGNKVS-KL-SFISK 215
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