1WR1,2JY5,1VEG,1QZE,2QSF,2QNJ


Conserved Protein Domain Family
UBA

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pfam00627: UBA (this model, PSSM-Id:201355 is obsolete and has been replaced by 395502)
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UBA/TS-N domain
This small domain is composed of three alpha helices. This family includes the previously defined UBA and TS-N domains. The UBA-domain (ubiquitin associated domain) is a novel sequence motif found in several proteins having connections to ubiquitin and the ubiquitination pathway. The structure of the UBA domain consists of a compact three helix bundle. This domain is found at the N terminus of EF-TS hence the name TS-N. The structure of EF-TS is known and this domain is implicated in its interaction with EF-TU. The domain has been found in non EF-TS proteins such as alpha-NAC and MJ0280.
Statistics
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PSSM-Id: 201355
Aligned: 142 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WR1_B  16 RYEHQLRQLNDMGfFDFD-RNVAALRRSGGSVQGALDSL 53  baker's yeast
Q9FI61 153 SLEEKVKRLVEMG-FGDA-QVRSAIESSGGDENLALEKL 189 thale cress
P90879 263 GYEQQAATLREFG-FENDeLIQLALEQANGDVQAAMEFL 300 Caenorhabditis elegans
Q10169 313 RYAEQLSQLNEMG-FVDFeRNVQALRRSGGNVQGAIESL 350 Schizosaccharomyces pombe 972h-
Q9VHX2 373 RFTEQLRTMAAMG-FINHtQNVSYLELSDGNVEHAINLL 410 fruit fly
Q9SII8 508 RYATQLQQLQEMG-FYDRaENIRALLATNGNVNAAVERL 545 thale cress
2JY5_A  11 RFQQQLEQLSAMG-FLNReANLQALIATGGDINAAIERL 48  human
Q9VWD9 501 RYQSQLEQLNAMG-FVNRdANLQALIATFGDINAAVERL 538 fruit fly
P40956 194 RYSRQLAELKDMG-FGDTnKNLDALSSAHGNINRAIDYL 231 Saccharomyces cerevisiae S288c
O74345 157 RYADSLSTLHDMG-FSDDsVNTHALEETNGDVTRAIEKI 194 Schizosaccharomyces pombe 972h-
Q9FI61 153 SLEEKVKRLVEMG-FGDA-QVRSAIESSGGDENLALEKL 189 thale cress
P90879 263 GYEQQAATLREFG-FENDeLIQLALEQANGDVQAAMEFL 300 Caenorhabditis elegans
Q10169 313 RYAEQLSQLNEMG-FVDFeRNVQALRRSGGNVQGAIESL 350 Schizosaccharomyces pombe 972h-
Q9VHX2 373 RFTEQLRTMAAMG-FINHtQNVSYLELSDGNVEHAINLL 410 fruit fly
Q9SII8 508 RYATQLQQLQEMG-FYDRaENIRALLATNGNVNAAVERL 545 thale cress
2JY5_A  11 RFQQQLEQLSAMG-FLNReANLQALIATGGDINAAIERL 48  human
Q9VWD9 501 RYQSQLEQLNAMG-FVNRdANLQALIATFGDINAAVERL 538 fruit fly
P40956 194 RYSRQLAELKDMG-FGDTnKNLDALSSAHGNINRAIDYL 231 Saccharomyces cerevisiae S288c
O74345 157 RYADSLSTLHDMG-FSDDsVNTHALEETNGDVTRAIEKI 194 Schizosaccharomyces pombe 972h-
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