1NEX,1NEX,1NEX,1PEV,1PGU,3MMY,1U4C,3MMY,2PM9,3MMY,1U4C,1PEV,1PGU,1PGU,1PEV,3MMY,1U4C,1PGU,3RFH,1R5M,2PM6,1NEX,1PEV,3RFH,1R5M,1PEV,1PEV,1SQ9,2XU7,3RFH,2PM9,2PM9,1PGU,1PEV,3RFH,2PM9,1R5M,1PEV,1SQ9,2PM6,2YBA


Conserved Protein Domain Family
WD40

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pfam00400: WD40 (this model, PSSM-Id:201208 is obsolete and has been replaced by 334060)
Click on image for an interactive view with Cn3D
WD domain, G-beta repeat
Statistics
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PSSM-Id: 201208
View PSSM: pfam00400
Aligned: 1837 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
1NEX_B       260 PYFVGVLRGHXASVRTVSGHGN------IVVSGSYDNTLIVWD 296
gi 83305440  104 GGQPVTVAMHEGPIAAMAWIPGm----nLLATGSWDKTLKYWD 142
gi 731499    111 SGQTQQIGMHSAPIKVLRFVQCgpsnteCIVTGSWDKTIKYWD 153
3MMY_C       117 SNQAIQIAQHDAPVKTIHWIKApn--ysCVMTGSWDKTLKFWD 157
gi 3123163   120 SNQVAVVGTHDGPVKTCHWINGnn--yqCLMTGSFDKTLRFWD 160
gi 74676062  110 ATAPIQVAAHDAPIRCCHMIPNpaggtpLLVTGSWDKQVKYWD 152
gi 1172829   105 TGQNQQVAAHDDAVRCVRFVEAmgt-spILATGSWDKTLKYWD 146
gi 25091532    3 STKCIQKQAHKEGIWCCTWGENrnrnkqYIITGSLDNGLIAWE 45
gi 12644484  350 YPTAEIPFAHDLGIWSMQYHPLg----hLLCTGSNDKTTRFWS 388
gi 322487775  67 SNQKAVVASHDLPISCLDFLTLpqtmsqMLITGSWDGKLRWWD 109
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