3KYN,1NEZ,1ZAG,1KJM,1VGK,2VE6,1QO3,1KPR


Conserved Protein Domain Family
MHC_I

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pfam00129: MHC_I (this model, PSSM-Id:201024 is obsolete and has been replaced by 395078)
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Class I Histocompatibility antigen, domains alpha 1 and 2
Statistics
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PSSM-Id: 201024
Aligned: 25 rows
Threshold Bit Score: -1
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KYN_A   2 SHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDSDSASPRMEPRAPWVEQEG-PEYWEEETRNTKAHAQTDRMNLQT 80  human
1NEZ_A   2 SHSLRYFYTALSRPAISEPWYIAVGYLDDTQFARFDSAGETGTYKLSAPWVEQEG-PEYWARETEIVTSNAQFFRENLQT 80  house mouse
P15979  24 LHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTAR--RYVPRTEWIAAKAdQQYWDGQTQIGQGNEQIDRENLGI 101 chicken
1ZAG_A   3 RYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDR--KSQPMGLWRQVEG-MEDWKQDSQLQKAREDIFMETLKD 79  human
P14429  23 QHSLQYFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEG-PEYWERETQIAKGHEQSFRGSLRT 101 house mouse
P01898  26 SHSMRYFETSVSRPGLGEPRFIIVGYVDDTQFVRFDSDAETPRMEPRAPWMEQEG-PEYWERETQRAKGNEQSFHVSLRT 104 house mouse
1VGK_A   2 PHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEG-PEYWEEQTQRAKSDEQWFRVSLRT 80  house mouse
2VE6_J   2 PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEG-PEYWERETQKAKGQEQWFRVSLRN 80  house mouse
P14426  26 PHSLRYFETVVSRPGLGEPRFISVGYVDNTEFVRFDSDAENPRDEPRVRWMEQEG-PEYWERETQIAKGNEQSFRVDLRT 104 house mouse
1QO3_A   2 SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEG-PEYWERETRRAKGNEQSFRVDLRT 80  house mouse
1NEZ_A   2 SHSLRYFYTALSRPAISEPWYIAVGYLDDTQFARFDSAGETGTYKLSAPWVEQEG-PEYWARETEIVTSNAQFFRENLQT 80  house mouse
P15979  24 LHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTAR--RYVPRTEWIAAKAdQQYWDGQTQIGQGNEQIDRENLGI 101 chicken
1ZAG_A   3 RYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDR--KSQPMGLWRQVEG-MEDWKQDSQLQKAREDIFMETLKD 79  human
P14429  23 QHSLQYFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEG-PEYWERETQIAKGHEQSFRGSLRT 101 house mouse
P01898  26 SHSMRYFETSVSRPGLGEPRFIIVGYVDDTQFVRFDSDAETPRMEPRAPWMEQEG-PEYWERETQRAKGNEQSFHVSLRT 104 house mouse
1VGK_A   2 PHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEG-PEYWEEQTQRAKSDEQWFRVSLRT 80  house mouse
2VE6_J   2 PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEG-PEYWERETQKAKGQEQWFRVSLRN 80  house mouse
P14426  26 PHSLRYFETVVSRPGLGEPRFISVGYVDNTEFVRFDSDAENPRDEPRVRWMEQEG-PEYWERETQIAKGNEQSFRVDLRT 104 house mouse
1QO3_A   2 SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEG-PEYWERETRRAKGNEQSFRVDLRT 80  house mouse
3KYN_A  81 LRGYYNQSEASSHTLQWMIGCDLGSDGRLIRGYERYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQ-RRAY 159 human
1NEZ_A  81 MLDYYNLSQNGSHTIQVMYGCEVEFFGSLFRAYEQHGYDGQDYIALNEDLKTWTAADMAAEITRSKWEQAGYTEL-RRTY 159 house mouse
P15979 102 LQRRYNQT-GGSHTVQWMYGCDILEGG-PIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESEPER-WKNY 178 chicken
1ZAG_A  80 IVEYYNDS-NGSHVLQGRFGCEIENNR-SSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQrAKAY 157 human
P14429 102 AQSYYNQSKGGSHTLQWMYGCDMGSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEK-DQAY 180 house mouse
P01898 105 LLGYYNQSESGSHTIQWMYGCKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQAGAAEY-YRAY 183 house mouse
1VGK_A  81 AQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQAGDAEY-YRAY 159 house mouse
2VE6_J  81 LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEH-YKAY 159 house mouse
P14426 105 LLRYYNQSEGGSHTIQRLSGCDVGSDWRLLRGYEQFAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAGAAER-DRAY 183 house mouse
1QO3_A  81 ALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAER-DRAY 159 house mouse
1NEZ_A  81 MLDYYNLSQNGSHTIQVMYGCEVEFFGSLFRAYEQHGYDGQDYIALNEDLKTWTAADMAAEITRSKWEQAGYTEL-RRTY 159 house mouse
P15979 102 LQRRYNQT-GGSHTVQWMYGCDILEGG-PIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESEPER-WKNY 178 chicken
1ZAG_A  80 IVEYYNDS-NGSHVLQGRFGCEIENNR-SSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQrAKAY 157 human
P14429 102 AQSYYNQSKGGSHTLQWMYGCDMGSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEK-DQAY 180 house mouse
P01898 105 LLGYYNQSESGSHTIQWMYGCKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQAGAAEY-YRAY 183 house mouse
1VGK_A  81 AQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQAGDAEY-YRAY 159 house mouse
2VE6_J  81 LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEH-YKAY 159 house mouse
P14426 105 LLRYYNQSEGGSHTIQRLSGCDVGSDWRLLRGYEQFAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAGAAER-DRAY 183 house mouse
1QO3_A  81 ALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAER-DRAY 159 house mouse
3KYN_A 160 LEGTCVEWLHRYLENGKEML 179 human
1NEZ_A 160 LEGPCKDSLLRYLENRKKTQ 179 house mouse
P15979 179 LEETCVEWLRRYVEYGKAEL 198 chicken
1ZAG_A 158 LEEECPATLRKYLKYSKNIL 177 human
P14429 181 LEGTCMQSLRRYLQLGKETL 200 house mouse
P01898 184 LEAECVEWLLRYLELGKETL 203 house mouse
1VGK_A 160 LEGECVEWLRRYLELGNETL 179 house mouse
2VE6_J 160 LEGECVEWLHRYLKNGNATL 179 house mouse
P14426 184 LEGTCVEWLRRYLELGNATL 203 house mouse
1QO3_A 160 LEGECVEWLRRYLKNGNATL 179 house mouse
1NEZ_A 160 LEGPCKDSLLRYLENRKKTQ 179 house mouse
P15979 179 LEETCVEWLRRYVEYGKAEL 198 chicken
1ZAG_A 158 LEEECPATLRKYLKYSKNIL 177 human
P14429 181 LEGTCMQSLRRYLQLGKETL 200 house mouse
P01898 184 LEAECVEWLLRYLELGKETL 203 house mouse
1VGK_A 160 LEGECVEWLRRYLELGNETL 179 house mouse
2VE6_J 160 LEGECVEWLHRYLKNGNATL 179 house mouse
P14426 184 LEGTCVEWLRRYLELGNATL 203 house mouse
1QO3_A 160 LEGECVEWLRRYLKNGNATL 179 house mouse
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