3L1P,1PUF


Conserved Protein Domain Family
Homeobox

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pfam00046: Homeobox (this model, PSSM-Id:200956 is obsolete and has been replaced by 333795)
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Homeobox domain
Statistics
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PSSM-Id: 200956
View PSSM: pfam00046
Aligned: 186 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L1P_A  97 KRKRTSIENRVRWSLETMFLK-SPKPSLQQITHIANQL-----GLEKDVVRVWFSNRRQKGKR 153 house mouse
Q22810 212 KKTKSPFTEHEIAVMMALFEI-NKSPNHEEVQKLAVQL-----NLGYRSVANFFMNKRAKERK 268 Caenorhabditis elegans
Q8W0F1  11 KCGRWNPTAEQVKVLTELFRAgLRTPSTEQIQRISTHLsa-fgKVESKNVFYWFQNHKARERH 72  Oryza sativa Japonica Group
Q8H1D2  21 KCGRWNPTVEQLKILTDLFRAgLRTPTTDQIQKISTELsf-ygKIESKNVFYWFQNHKARERQ 82  thale cress
Q6X7K0  73 VSSRWNPTPDQLRVLEELYRQgTRTPSADHIQQITAQLrr-ygKIEGKNVFYWFQNHKARERQ 134 thale cress
Q9ZVF5  58 ATLRWNPTPEQITTLEELYRSgTRTPTTEQIQQIASKLrk-ygRIEGKNVFYWFQNHKARERL 119 thale cress
Q6X7K1  11 SSSRWNPTKDQITLLENLYKEgIRTPSADQIQQITGRLra-ygHIEGKNVFYWFQNHKARQRQ 72  thale cress
Q8LR86  41 ANARWTPTKEQIAVLEGLYRQgLRTPTAEQIQQITARLre-hgHIEGKNVFYWFQNHKARQRQ 102 Oryza sativa Japonica Group
Q6X7J4  52 PKPRWNPKPEQIRILEAIFNSgMVNPPREEIRRIRAQLqe-ygQVGDANVFYWFQNRKSRSKH 113 thale cress
Q9FNM1  51 PKPEWKPNQHQAQILEELFIGgTVNPSLTSIKQITIKLqsygeEVDDADVYKWFHNRKYSRKP 113 thale cress
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