1H8C


Conserved Protein Domain Family
Faf1_UBX

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cd01771: Faf1_UBX (this model, PSSM-Id:176366 is obsolete and has been replaced by 340469)
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Faf1 UBX domain
Faf1 (fas-associated factor1) is a nucleolar protein that was first identified as an interaction partner of the death receptor Fas. Faf1 contains N-terminal UAS (ubiquitin-associated) and C-terminal UBX (ubiquitin-like) domains and is closely related to other UBA/UBX-containing proteins like p47, Rep8 and SAKS1. Faf1 is thought to be involved in 18S rRNA synthesis and/or 40S ribosomal subunit assembly. The UBX domain has a beta-grasp fold similar to that of ubiquitin however, UBX lacks the c-terminal double glycine motif and is thus unlikely to be conjugated to other proteins.
Statistics
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PSSM-Id: 176366
Aligned: 6 rows
Threshold Bit Score: 135.25
Created: 8-May-2010
Updated: 17-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1H8C_A      2 AEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTq-LDPNKSLLEVKLFPQETLFLEA 80  human
NP_998138 593 GEPISKLRIRTPSGEFLERRFLGTCKLQVLFDFVASKGYPSDEFKLLTTFPRRNITq-LDPAWNLVEAKLFPQETLFLEA 671 zebrafish
XP_392750 568 GDGVLKVRVRLPAGKFLERRFQSDTPLQTLLNFLIVEGYPTEEYKVLCSWPRRDLTs-MDSKLTLMDLKFCPQETVILEE 646 honey bee
AAH45062  577 SEPLSKLRIRTPSGKFLERRFLGSSPLQVVLDFVASKGYPCHEFKLLSTFPRRDITq-LDPNRSLLDLKLYPQETLFLEA 655 African clawed frog
XP_316513 443 GESITKIRVRTPAGDMLERKFTVDTPLELLLNYITAEGYLIDEFKVISSWPRRDVRilGRKGFTLKELKLYPQETLILEE 522 Anopheles gambiae ...
NP_611080 616 ETGTSKIRVRKPTGDFLERRFFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTa-IESSQTLESLKLYPQETVILEE 694 fruit fly
1H8C_A     81 K 81  human
NP_998138 672 K 672 zebrafish
XP_392750 647 R 647 honey bee
AAH45062  656 K 656 African clawed frog
XP_316513 523 R 523 Anopheles gambiae str. PEST
NP_611080 695 R 695 fruit fly
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