Conserved Protein Domain Family
STKc_CDKL2_3

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cd07846: STKc_CDKL2_3 (this model, PSSM-Id:173743 is obsolete and has been replaced by 270836)
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype.
Statistics
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PSSM-Id: 173743
Aligned: 9 rows
Threshold Bit Score: -1
Created: 24-Sep-2008
Updated: 17-Jan-2013
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:
  • Comment:based on the structure of human CDK2 bound with ATP and substrate peptide, and on the structures of other CDKs or MAPKs, bound with ATP or ATP analogs
  • Citation:PMID 9739089

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                ####    #            # #                 #             #               #
4505569        2 EKYENLGlVGEGSYGMVMKCRNKDtgRIVAIKKFLESDDDk-mVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 80   human
XP_426294      2 EKYQVLGlIGEGSYGVVSRCRNKEsgQVVAVKKFLESEDNa-aVRKIAVREIKLLKQLRHENLVSLLEVYKKKKRWYLVF 80   chicken
AAH74132       2 EKYENLGlVGEGSYGMVMKCRNKEtgRIVAIKKFLESEDDk-mVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 80   African clawed...
XP_396731      2 NKYEMIEiVGEGSYGMVMKCKHREtgQFVAIKRFLESEESdyeVRKMAFREIRMLKKLRHDNLVNMIEVFRRKKRFYLVF 81   honey bee
XP_784044      2 EKYESFGlVGEGSYGQVLKCRHKEtnQVVAIKKFLEGEDDk-mVKKIAMREVRMLKQLRHENLVNLIEVFRRKKRLYLVF 80   purple urchin
XP_002119969   2 EKYDNLGmVGEGSYGMVMKCKHKEsgQIVAIKKFLESEDDk-mVKKIAMREVRMLRKLHHENLVNLIEVFRRRKRLYLVF 80   Ciona intestin...
Q8IVW4         2 EMYETLGkVGEGSYGTVMKCKHKNtgQIVAIKIFYERPEQs--VNKIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLVF 79   human
XP_001627502   2 EKYENLGlVGEGSYGMVMKCRHKDsnQIVAIKKFIESEDDk-mVKKIAMREVRMLRQLRHENLVNLIEVFRRKKRLFLVF 80   starlet sea an...
CAZ35066       2 EKYENLGlVGEGSYGMVIKCKNKEsgRIVAIKKFIDSEDDk-hVKKIALREIRMLKQLRHDNLVNLLEVFRRKKRLYLVF 80   Schistosoma ma...
XP_426294      2 EKYQVLGlIGEGSYGVVSRCRNKEsgQVVAVKKFLESEDNa-aVRKIAVREIKLLKQLRHENLVSLLEVYKKKKRWYLVF 80   chicken
AAH74132       2 EKYENLGlVGEGSYGMVMKCRNKEtgRIVAIKKFLESEDDk-mVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 80   African clawed...
XP_396731      2 NKYEMIEiVGEGSYGMVMKCKHREtgQFVAIKRFLESEESdyeVRKMAFREIRMLKKLRHDNLVNMIEVFRRKKRFYLVF 81   honey bee
XP_784044      2 EKYESFGlVGEGSYGQVLKCRHKEtnQVVAIKKFLEGEDDk-mVKKIAMREVRMLKQLRHENLVNLIEVFRRKKRLYLVF 80   purple urchin
XP_002119969   2 EKYDNLGmVGEGSYGMVMKCKHKEsgQIVAIKKFLESEDDk-mVKKIAMREVRMLRKLHHENLVNLIEVFRRRKRLYLVF 80   Ciona intestin...
Q8IVW4         2 EMYETLGkVGEGSYGTVMKCKHKNtgQIVAIKIFYERPEQs--VNKIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLVF 79   human
XP_001627502   2 EKYENLGlVGEGSYGMVMKCRHKDsnQIVAIKKFIESEDDk-mVKKIAMREVRMLRQLRHENLVNLIEVFRRKKRLFLVF 80   starlet sea an...
CAZ35066       2 EKYENLGlVGEGSYGMVIKCKNKEsgRIVAIKKFIDSEDDk-hVKKIALREIRMLKQLRHDNLVNLLEVFRRKKRLYLVF 80   Schistosoma ma...
Feature 1        ###  # ##                                    # # ## #          #  #            #
4505569       81 EFVDHTILDDLELfpnGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSqsGVVKLCDFGFARTLAAPG-EVYT 159  human
XP_426294     81 EFVDHTVLDDLEAfpnGLDYSRVRKYLFQILRGIAFCHSQNIIHRDIKPENILVSqsGVVKLCDFGFARTLAASG-EAYT 159  chicken
AAH74132      81 EFVDRTVLDDLEQfpnGLDFNRVRKYLFQIIRGIGFCHNHNIIHRDIKPENILVSlsGIVKLCDFGFARTLAGPG-EDYT 159  African clawed...
XP_396731     82 EYLDHTLLNELENaegGLGLEMSKRYIYQVLRGLDFCHNNNIMHRDIKPENILISpnGVVKLCDFGFARFVNSPN-ESCT 160  honey bee
XP_784044     81 EFMDHTVLDELEKypmGLDESLVRKYMWQILKGIEFCHINNIIHRDIKPENILVSksKVVKLCDFGFARTIAGPG-EIYT 159  purple urchin
XP_002119969  81 EFVDHTVLDDLEKypnGLNEMTVRKILWQVLRGVEFCHSHNIIHRDIKPENILNSrsGVIKLCDFGFARTLAAPG-EVYT 159  Ciona intestin...
Q8IVW4        80 EFIDHTVLDELQHychGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSqsGITKLCDFGFARTLAAPG-DIYT 158  human
XP_001627502  81 EFVDHTVLDDLERypnGLDENTVRKVMWQVLRAIEFIHRHNIIHRDVKPENILVSrsGIVKLCDFGFARTLASGQgEAYT 160  starlet sea an...
CAZ35066      81 EFVDNTILDDLEKnpnGIDELRTKRTLFQVIRGVEFCHLHNIVHRDIKPENILISrnGVVKLCDFGFARTLAAPG-EVYT 159  Schistosoma ma...
XP_426294     81 EFVDHTVLDDLEAfpnGLDYSRVRKYLFQILRGIAFCHSQNIIHRDIKPENILVSqsGVVKLCDFGFARTLAASG-EAYT 159  chicken
AAH74132      81 EFVDRTVLDDLEQfpnGLDFNRVRKYLFQIIRGIGFCHNHNIIHRDIKPENILVSlsGIVKLCDFGFARTLAGPG-EDYT 159  African clawed...
XP_396731     82 EYLDHTLLNELENaegGLGLEMSKRYIYQVLRGLDFCHNNNIMHRDIKPENILISpnGVVKLCDFGFARFVNSPN-ESCT 160  honey bee
XP_784044     81 EFMDHTVLDELEKypmGLDESLVRKYMWQILKGIEFCHINNIIHRDIKPENILVSksKVVKLCDFGFARTIAGPG-EIYT 159  purple urchin
XP_002119969  81 EFVDHTVLDDLEKypnGLNEMTVRKILWQVLRGVEFCHSHNIIHRDIKPENILNSrsGVIKLCDFGFARTLAAPG-EVYT 159  Ciona intestin...
Q8IVW4        80 EFIDHTVLDELQHychGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSqsGITKLCDFGFARTLAAPG-DIYT 158  human
XP_001627502  81 EFVDHTVLDDLERypnGLDENTVRKVMWQVLRAIEFIHRHNIIHRDVKPENILVSrsGIVKLCDFGFARTLASGQgEAYT 160  starlet sea an...
CAZ35066      81 EFVDNTILDDLEKnpnGIDELRTKRTLFQVIRGVEFCHLHNIVHRDIKPENILISrnGVVKLCDFGFARTLAAPG-EVYT 159  Schistosoma ma...
Feature 1         #### #                                     #                                   
4505569      160 DYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP-----------RHQEL 228  human
XP_426294    160 DYVATRWYRAPELLVGDTKYGRAVDVWAIGCLVTEMLTGEPLFPGDSDIDQLYHITKCLGNLIP-----------RHQEL 228  chicken
AAH74132     160 DYVATRWYRAPELLVGDIKYGKAVDVWAIGCIVTEMLTAQPLFPGDSDIDQLHHIIKCQGNLTP-----------RHQEL 228  African clawed...
XP_396731    161 DYVATRWYRAPELLVGDPRYGRPIDIWAVGCLYAEMVVGNPLFPGDSDVDQLYRITKILGNFLKecctvlgglcmKHQTL 240  honey bee
XP_784044    160 DYVATRWYRAPELLVGDTKYGKAIDLWAVGCLQAEMLTGEPLFPGDSDIDQLYHIIRCFGTLIQ-----------RHKEI 228  purple urchin
XP_002119969 160 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLITEMLTGDPLFPGDSDIDQLYHIIKCFGNLCP-----------RHREI 228  Ciona intestin...
Q8IVW4       159 DYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSP-----------HLQNI 227  human
XP_001627502 161 DYVATRWYRAPELLVGDTKYGRAVDVWAVGCLLAEMLTGEPLFPGDSDIDQLYHIMRCFGNLIS-----------RHREI 229  starlet sea an...
CAZ35066     160 DYVATRWYRAPELLVGDTKYGRPIDIWAIGCLASEMLTGDPLFPGDSDIDQLHRIVRCLGNLSE-----------KYQNI 228  Schistosoma ma...
XP_426294    160 DYVATRWYRAPELLVGDTKYGRAVDVWAIGCLVTEMLTGEPLFPGDSDIDQLYHITKCLGNLIP-----------RHQEL 228  chicken
AAH74132     160 DYVATRWYRAPELLVGDIKYGKAVDVWAIGCIVTEMLTAQPLFPGDSDIDQLHHIIKCQGNLTP-----------RHQEL 228  African clawed...
XP_396731    161 DYVATRWYRAPELLVGDPRYGRPIDIWAVGCLYAEMVVGNPLFPGDSDVDQLYRITKILGNFLKecctvlgglcmKHQTL 240  honey bee
XP_784044    160 DYVATRWYRAPELLVGDTKYGKAIDLWAVGCLQAEMLTGEPLFPGDSDIDQLYHIIRCFGTLIQ-----------RHKEI 228  purple urchin
XP_002119969 160 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLITEMLTGDPLFPGDSDIDQLYHIIKCFGNLCP-----------RHREI 228  Ciona intestin...
Q8IVW4       159 DYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSP-----------HLQNI 227  human
XP_001627502 161 DYVATRWYRAPELLVGDTKYGRAVDVWAVGCLLAEMLTGEPLFPGDSDIDQLYHIMRCFGNLIS-----------RHREI 229  starlet sea an...
CAZ35066     160 DYVATRWYRAPELLVGDTKYGRPIDIWAIGCLASEMLTGDPLFPGDSDIDQLHRIVRCLGNLSE-----------KYQNI 228  Schistosoma ma...
Feature 1                                                                           
4505569      229 FNKNPVFAGvRLPEIKEREP--------LERRYPKlSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 287  human
XP_426294    229 FCKNPLFAGmRLPEVKEAES--------LDRRYPKlSASVLDLAKKCLQIDPDKRPSCAELLQSDFF 287  chicken
AAH74132     229 FYRNPMFAGvSLPDMKEAES--------LERRYPKhSPVMLDLAKSCLHIDPEKRPACGTLLQHELF 287  African clawed frog
XP_396731    241 MDRSRPGQIlRHASADELIGppqsglfsIRKLFPKwDIIAIDFLAQCLRMDPDLRSKSSMLLEHPFF 307  honey bee
XP_784044    229 FLKNPLFVGmRLPEVKNVEP--------LEKRFPTlSGLSISMMKSCLHLDPDQRPTCTQFLKHEFF 287  purple urchin
XP_002119969 229 FQRNPLFAGmRLPDVRDIEP--------LERRFPKfSSEVLDLMKQCLRLDPNDRPSSSLLLRHEFF 287  Ciona intestinalis
Q8IVW4       228 FSKSPIFAGvVLPQVQHPKN--------ARKKYPKlNGLLADIVHACLQIDPADRISSSDLLHHEYF 286  human
XP_001627502 230 FQKNPLFVGmRLPDIKEVEP--------MERRFPRiSPMAVDMLKLCLKMDPSERPTCAQLLNHDFF 288  starlet sea anemone
CAZ35066     229 FHRNPLFVGmRVPFAKEIDP--------LDKRLAKvSKLTLGFIKTCLRIDANDRPTSSALLRSEYF 287  Schistosoma mansoni
XP_426294    229 FCKNPLFAGmRLPEVKEAES--------LDRRYPKlSASVLDLAKKCLQIDPDKRPSCAELLQSDFF 287  chicken
AAH74132     229 FYRNPMFAGvSLPDMKEAES--------LERRYPKhSPVMLDLAKSCLHIDPEKRPACGTLLQHELF 287  African clawed frog
XP_396731    241 MDRSRPGQIlRHASADELIGppqsglfsIRKLFPKwDIIAIDFLAQCLRMDPDLRSKSSMLLEHPFF 307  honey bee
XP_784044    229 FLKNPLFVGmRLPEVKNVEP--------LEKRFPTlSGLSISMMKSCLHLDPDQRPTCTQFLKHEFF 287  purple urchin
XP_002119969 229 FQRNPLFAGmRLPDVRDIEP--------LERRFPKfSSEVLDLMKQCLRLDPNDRPSSSLLLRHEFF 287  Ciona intestinalis
Q8IVW4       228 FSKSPIFAGvVLPQVQHPKN--------ARKKYPKlNGLLADIVHACLQIDPADRISSSDLLHHEYF 286  human
XP_001627502 230 FQKNPLFVGmRLPDIKEVEP--------MERRFPRiSPMAVDMLKLCLKMDPSERPTCAQLLNHDFF 288  starlet sea anemone
CAZ35066     229 FHRNPLFVGmRVPFAKEIDP--------LDKRLAKvSKLTLGFIKTCLRIDANDRPTSSALLRSEYF 287  Schistosoma mansoni

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