1H1W,1OKZ,1Z5M


Conserved Protein Domain Family
STKc_PDK1

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cd05581: STKc_PDK1 (this model, PSSM-Id:173672 is obsolete and has been replaced by 270733)
Click on image for an interactive view with Cn3D
Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume.
Statistics
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PSSM-Id: 173672
Aligned: 34 rows
Threshold Bit Score: -1
Created: 18-Jul-2006
Updated: 17-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:Based on the binding of peptide substrates and ATP analogs to the AGC kinases, PKA and PKB.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #####   #                # #                                     
1H1W_A     10 EDFKFGKI-------LGEGSFSTVVLAREla----tsREYAIKILEKrHIIKENKv-PYVTRERDVMSRLd-----HPFF 72  human
Q9Y1J3     67 NDFMFLQS-------MGEGAYSQVFRCREva----tdAMFAVKVLQKsYLNRHQKm-DAIIREKNILTYLsqecggHPFV 134 nematode
AAC68917   24 ADYSVEKE-------VGEGSFSTVYLARRkepkndenPEVALKICLK-RLILKNKmvPYIHREKEALALIsreenaHPGI 95  nematode
XP_628089  29 DDFELFEL-------IGTGNFTQVFRAFDiv----nkTYVAIKVANKsQLRALKKe-GEILNEKKICTKLnn--srSRNV 94  Cryptosporidium pa...
XP_762966  35 DDFDFERN-------IGSGNFSNVWHVTLksn---pfISYALKIYNIsLVNSKNHe-NFVKQERASLLCLns--pgHKNV 101 Theileria parva st...
XP_742672  33 DDFEIYMH-------IGSGNFSDVFMVKLksd---psKIYSLKIFSKeKVNRMNKv-NSVLTEKQVITKLns--pgHSNV 99  Plasmodium chabaud...
CAJ06102   17 VQFRPEQLqlgtgipLGSGAISQVVQCRLrcaa-aplLPVVVKIVSKiQVLQQGKv-QSVMNEKATLQRLa----pFPYV 90  Leishmania major
CAK66678   75 EDFADFEV-------LGHGNFSDIYKVREie----tnQVYALKQINKrKLTQVNKe-KDVYMEKHCLGKLt----dNPYC 138 Paramecium tetraur...
CAK76726   20 QDYVSIGS-------LGRGAYGEVILAQKkt----dnQQVAIKVIDKkFLTREQKq-YQVYIEREMLLYLk-----HPGV 82  Paramecium tetraur...
CAK91661   15 DNYEIVKP-------LGQGAYSEVVLAKSkv----tgHESALKIVDKaFLVKEKKm-HHACIEREVLAYLr-----HKGI 77  Paramecium tetraur...
Q9Y1J3     67 NDFMFLQS-------MGEGAYSQVFRCREva----tdAMFAVKVLQKsYLNRHQKm-DAIIREKNILTYLsqecggHPFV 134 nematode
AAC68917   24 ADYSVEKE-------VGEGSFSTVYLARRkepkndenPEVALKICLK-RLILKNKmvPYIHREKEALALIsreenaHPGI 95  nematode
XP_628089  29 DDFELFEL-------IGTGNFTQVFRAFDiv----nkTYVAIKVANKsQLRALKKe-GEILNEKKICTKLnn--srSRNV 94  Cryptosporidium pa...
XP_762966  35 DDFDFERN-------IGSGNFSNVWHVTLksn---pfISYALKIYNIsLVNSKNHe-NFVKQERASLLCLns--pgHKNV 101 Theileria parva st...
XP_742672  33 DDFEIYMH-------IGSGNFSDVFMVKLksd---psKIYSLKIFSKeKVNRMNKv-NSVLTEKQVITKLns--pgHSNV 99  Plasmodium chabaud...
CAJ06102   17 VQFRPEQLqlgtgipLGSGAISQVVQCRLrcaa-aplLPVVVKIVSKiQVLQQGKv-QSVMNEKATLQRLa----pFPYV 90  Leishmania major
CAK66678   75 EDFADFEV-------LGHGNFSDIYKVREie----tnQVYALKQINKrKLTQVNKe-KDVYMEKHCLGKLt----dNPYC 138 Paramecium tetraur...
CAK76726   20 QDYVSIGS-------LGRGAYGEVILAQKkt----dnQQVAIKVIDKkFLTREQKq-YQVYIEREMLLYLk-----HPGV 82  Paramecium tetraur...
CAK91661   15 DNYEIVKP-------LGQGAYSEVVLAKSkv----tgHESALKIVDKaFLVKEKKm-HHACIEREVLAYLr-----HKGI 77  Paramecium tetraur...
Feature 1     #               ## #   # #                                                      
1H1W_A     73 VKLYFTFQDdeKLYFGLSYAkNGELLKYIRKig----------------------------------------------- 105 human
Q9Y1J3    135 TQLYTHFHDqaRIYFVIGLVeNGDLGESLCHfg----------------------------------------------- 167 nematode
AAC68917   96 VTLYATFQDseSLYFVLEYAkYGDLCTLMQKqpd---------------------------------------------- 129 nematode
XP_628089  95 IKLLNSFANeeNVYLVYELCtDGELWQKILPig----------------------------------------------- 127 Cryptosporidium pa...
XP_762966 102 IKLIDTFKDnsNVYLIYEPAtEGELWDLVKYsg----------------------------------------------- 134 Theileria parva st...
XP_742672 100 IKLISTFKDkkNVYLLYEYA-DYELWEFLKTrs----------------------------------------------- 131 Plasmodium chabaud...
CAJ06102   91 VRLYGTAQSedELYFVLEWLpHGDLLQHIRYvaqervrqyneeeaaagstasmsspgtvaggttgsapdgppvaeasast 170 Leishmania major
CAK66678  139 IRLYSTFQDdeNLYMLMQYVdGGELWQQIHNfg----------------------------------------------- 171 Paramecium tetraur...
CAK76726   83 VQLYSTFQKpeKLYFVMEYLeGGDFADFLKLhk----------------------------------------------- 115 Paramecium tetraur...
CAK91661   78 IKLFHSFEDqsKLYYSLELLnDGNLLEYINKy------------------------------------------------ 109 Paramecium tetraur...
Q9Y1J3    135 TQLYTHFHDqaRIYFVIGLVeNGDLGESLCHfg----------------------------------------------- 167 nematode
AAC68917   96 VTLYATFQDseSLYFVLEYAkYGDLCTLMQKqpd---------------------------------------------- 129 nematode
XP_628089  95 IKLLNSFANeeNVYLVYELCtDGELWQKILPig----------------------------------------------- 127 Cryptosporidium pa...
XP_762966 102 IKLIDTFKDnsNVYLIYEPAtEGELWDLVKYsg----------------------------------------------- 134 Theileria parva st...
XP_742672 100 IKLISTFKDkkNVYLLYEYA-DYELWEFLKTrs----------------------------------------------- 131 Plasmodium chabaud...
CAJ06102   91 VRLYGTAQSedELYFVLEWLpHGDLLQHIRYvaqervrqyneeeaaagstasmsspgtvaggttgsapdgppvaeasast 170 Leishmania major
CAK66678  139 IRLYSTFQDdeNLYMLMQYVdGGELWQQIHNfg----------------------------------------------- 171 Paramecium tetraur...
CAK76726   83 VQLYSTFQKpeKLYFVMEYLeGGDFADFLKLhk----------------------------------------------- 115 Paramecium tetraur...
CAK91661   78 IKLFHSFEDqsKLYYSLELLnDGNLLEYINKy------------------------------------------------ 109 Paramecium tetraur...
Feature 1                                                   # # ## #         ##  #            
1H1W_A    106 -----------------sFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNedMHIQITDFGTAKVLSPesk--- 165 human
Q9Y1J3    168 -----------------sFDMLTSKFFASEILTGLQFLHDNKIVHRDMKPDNVLIQkdGHILITDFGSAQAFGGlqlsqe 230 nematode
AAC68917  130 ----------------skFNVADSRYYAANLLSALEHIHKLGIIHRDVKADNLLVKsdGRIMLTDFGSSKFLSDyqkiqe 193 nematode
XP_628089 128 -----------------iKPLRQAVYYLAQLLIAIEDIHNLNIVHRDIKAENCLLMknGQLKLADFGSSIHLDDvvcnsq 190 Cryptosporidium pa...
XP_762966 135 -----------------sISDEFASWIIHQVLDGLEYVHSKGIIHRDLKCENIVIAq-NTLKIIDFATSKHRNTndsith 196 Theileria parva st...
XP_742672 132 ----------------igVSENITFNIILQMVHALAYVHDKNVIHRDVKCENFLINkdGTIKLIDFGTSKDLDHipmenn 195 Plasmodium chabaud...
CAJ06102  171 gpskrataipasstalrcLDFHDIQLITAQLVLALEHTADRGVVLRDLKPENVAFDekYRACLLDFDTADLGGAenmpet 250 Leishmania major
CAK66678  172 -----------------aRAFPLCLYYISEIIKAINSIHNIGIVHRDIKSENILLTqdKKIKFIDFGTARDMNDptiegs 234 Paramecium tetraur...
CAK76726  116 -----------------dLSFQTLQFYLAQIVVILEYIHSKGIAHRDLKPENLMLSknGHLKLIDFGTSVVVHEnkvpae 178 Paramecium tetraur...
CAK91661  110 -----------------nFNEKMIQFYTAELLLILEYLHQNGLVHRDVKPENILLTkdKHLKLIDFGTVFVYDEskisig 172 Paramecium tetraur...
Q9Y1J3    168 -----------------sFDMLTSKFFASEILTGLQFLHDNKIVHRDMKPDNVLIQkdGHILITDFGSAQAFGGlqlsqe 230 nematode
AAC68917  130 ----------------skFNVADSRYYAANLLSALEHIHKLGIIHRDVKADNLLVKsdGRIMLTDFGSSKFLSDyqkiqe 193 nematode
XP_628089 128 -----------------iKPLRQAVYYLAQLLIAIEDIHNLNIVHRDIKAENCLLMknGQLKLADFGSSIHLDDvvcnsq 190 Cryptosporidium pa...
XP_762966 135 -----------------sISDEFASWIIHQVLDGLEYVHSKGIIHRDLKCENIVIAq-NTLKIIDFATSKHRNTndsith 196 Theileria parva st...
XP_742672 132 ----------------igVSENITFNIILQMVHALAYVHDKNVIHRDVKCENFLINkdGTIKLIDFGTSKDLDHipmenn 195 Plasmodium chabaud...
CAJ06102  171 gpskrataipasstalrcLDFHDIQLITAQLVLALEHTADRGVVLRDLKPENVAFDekYRACLLDFDTADLGGAenmpet 250 Leishmania major
CAK66678  172 -----------------aRAFPLCLYYISEIIKAINSIHNIGIVHRDIKSENILLTqdKKIKFIDFGTARDMNDptiegs 234 Paramecium tetraur...
CAK76726  116 -----------------dLSFQTLQFYLAQIVVILEYIHSKGIAHRDLKPENLMLSknGHLKLIDFGTSVVVHEnkvpae 178 Paramecium tetraur...
CAK91661  110 -----------------nFNEKMIQFYTAELLLILEYLHQNGLVHRDVKPENILLTkdKHLKLIDFGTVFVYDEskisig 172 Paramecium tetraur...
Feature 1                                                                                     
1H1W_A        --------------------------------------------------------------------------------     human
Q9Y1J3    231 gftdanqassrssds----------------------------------------------------------------- 245 nematode
AAC68917  194 npv----------------------------------------------------------------------------- 196 nematode
XP_628089 191 ncgssc-------------------------------------------------------------------------- 196 Cryptosporidium pa...
XP_762966 197 stpqdtlqdt---------------------------------------------------------------------- 206 Theileria parva st...
XP_742672 196 inecttkgdelsqfslkkdnninknlkneseentgilkddesnnnvldndnneeldkisnddiskkcrnkepqynesfkc 275 Plasmodium chabaud...
CAJ06102  251 nggvacpppvdaaavdeaessnggg------------------------------------------------------- 275 Leishmania major
CAK66678  235 gn------------------------------------------------------------------------------ 236 Paramecium tetraur...
CAK76726  179 flqkykqi------------------------------------------------------------------------ 186 Paramecium tetraur...
CAK91661  173 tkleeiriqyqk-------------------------------------------------------------------- 184 Paramecium tetraur...
Q9Y1J3    231 gftdanqassrssds----------------------------------------------------------------- 245 nematode
AAC68917  194 npv----------------------------------------------------------------------------- 196 nematode
XP_628089 191 ncgssc-------------------------------------------------------------------------- 196 Cryptosporidium pa...
XP_762966 197 stpqdtlqdt---------------------------------------------------------------------- 206 Theileria parva st...
XP_742672 196 inecttkgdelsqfslkkdnninknlkneseentgilkddesnnnvldndnneeldkisnddiskkcrnkepqynesfkc 275 Plasmodium chabaud...
CAJ06102  251 nggvacpppvdaaavdeaessnggg------------------------------------------------------- 275 Leishmania major
CAK66678  235 gn------------------------------------------------------------------------------ 236 Paramecium tetraur...
CAK76726  179 flqkykqi------------------------------------------------------------------------ 186 Paramecium tetraur...
CAK91661  173 tkleeiriqyqk-------------------------------------------------------------------- 184 Paramecium tetraur...
Feature 1                                           ######                          #     #  #
1H1W_A    166 --------------------------------qarANXFVGTAQYVSPELLTEksacKSSDLWALGCIIYQLVAGLPPFR 213 human
Q9Y1J3    246 --------------gsppptrfysdeevpeentarRTTFVGTALYVSPEMLADgdvgPQTDIWGLGCILFQCLAGQPPFR 311 nematode
AAC68917  197 ---------------------------eeeqptgrRSSFVGTAFFVTPELLTGsemsPSSDLWAFSVTLYLFLTGIYPFN 249 nematode
XP_628089 197 -----------------------ecrftinrgrreFKYFVGTPQFMAPETIRNkpptKAVDLWSFGCTVFQVICGYPPFN 253 Cryptosporidium pa...
XP_762966 207 -------------------lthskhskqdkslrrtFEYYVGTPNFMDPEAISNadsgFKRDFWSLGCLMYQVLVGRPPFY 267 Theileria parva st...
XP_742672 276 dnksttkcnndnsnnlydtmdsininkpnyrrkktFDNYVGTANFMPPEALINkcsgKVRDFWSLGCTIYQLVTCTIPFD 355 Plasmodium chabaud...
CAJ06102  276 ----gdaaaenggasssarrrrrltvsqihsmrrrTASFCGTAHYVSPEMVGEckwsFSSDLWALGALVYELVYGEHLFS 351 Leishmania major
CAK66678  237 ----------------------------grkgkqaFKHFVGTPQFMAPECIRNkdsnEKSDIYSLGVLFYHIVFGKYPFD 288 Paramecium tetraur...
CAK76726  187 ----------------------kssfqtqegsfinRASFVGTAEYVSPEMLEEepceYAVDLWALGIICYKMFTGVTPFN 244 Paramecium tetraur...
CAK91661  185 -----------------qrspslndfekppikycrDSSFVGTSEYLCPELIDYnvvgPQADLWALGCFIYQLYTHRTPFY 247 Paramecium tetraur...
Q9Y1J3    246 --------------gsppptrfysdeevpeentarRTTFVGTALYVSPEMLADgdvgPQTDIWGLGCILFQCLAGQPPFR 311 nematode
AAC68917  197 ---------------------------eeeqptgrRSSFVGTAFFVTPELLTGsemsPSSDLWAFSVTLYLFLTGIYPFN 249 nematode
XP_628089 197 -----------------------ecrftinrgrreFKYFVGTPQFMAPETIRNkpptKAVDLWSFGCTVFQVICGYPPFN 253 Cryptosporidium pa...
XP_762966 207 -------------------lthskhskqdkslrrtFEYYVGTPNFMDPEAISNadsgFKRDFWSLGCLMYQVLVGRPPFY 267 Theileria parva st...
XP_742672 276 dnksttkcnndnsnnlydtmdsininkpnyrrkktFDNYVGTANFMPPEALINkcsgKVRDFWSLGCTIYQLVTCTIPFD 355 Plasmodium chabaud...
CAJ06102  276 ----gdaaaenggasssarrrrrltvsqihsmrrrTASFCGTAHYVSPEMVGEckwsFSSDLWALGALVYELVYGEHLFS 351 Leishmania major
CAK66678  237 ----------------------------grkgkqaFKHFVGTPQFMAPECIRNkdsnEKSDIYSLGVLFYHIVFGKYPFD 288 Paramecium tetraur...
CAK76726  187 ----------------------kssfqtqegsfinRASFVGTAEYVSPEMLEEepceYAVDLWALGIICYKMFTGVTPFN 244 Paramecium tetraur...
CAK91661  185 -----------------qrspslndfekppikycrDSSFVGTSEYLCPELIDYnvvgPQADLWALGCFIYQLYTHRTPFY 247 Paramecium tetraur...
Feature 1                                                                                     
1H1W_A    214 AGneYLIFQKII-----KLEYDFPEKf-----------------fPKARDLVEKLLVLdATKRLGceem---egyGPLKA 268 human
Q9Y1J3    312 AVnqYHLLKRIQ-----ELDFSFPEGf-----------------pEEASEIIAKILVRdPSTRITs---------QELMA 360 nematode
AAC68917  250 DMseYLVFRRIQ-----DILYTFSEDfp----------------dENAKNLIERLLVKeQKSRLTs---------QEIKE 299 nematode
XP_628089 254 APseFLVFCRVF-----QNGLRFPPDf-----------------pKDAKLLVESLLKQePSERATi---------EEVKK 302 Cryptosporidium pa...
XP_762966 268 GSteYFIIDRVR-----KFDLSFPPSi-----------------nPDAKDLILSLLRD-PEDRLGf---------DQIRA 315 Theileria parva st...
XP_742672 356 GSteWFIYNKIK-----KREINYPPIi-----------------pLDLVDLIEKLITInPECRLGfkn-----gcEDVLQ 408 Plasmodium chabaud...
CAJ06102  352 GMtqFEVLQKVVhgtyvERQELFPRInfaddadgeaeqccggrrfAAVKDFIQRLLLTdPQKRLGvhpdthrfdaTALRR 431 Leishmania major
CAK66678  289 GKsdYLVFQQAL-----ETELQFPEGwi---------------dnEQFRSLIRKMLQKdSQDRPTl---------AEIMQ 339 Paramecium tetraur...
CAK76726  245 DStqYLVFQNVK-----NAQLKIPENi-----------------pKVAANLIQQILVRnPQERLGsq------smADLKS 296 Paramecium tetraur...
CAK91661  248 SDneFQLFHNIS-----QCEWEQDQRi-----------------pNDALELIKILLDRnPQNRFYgdlndsdynyDSLKK 305 Paramecium tetraur...
Q9Y1J3    312 AVnqYHLLKRIQ-----ELDFSFPEGf-----------------pEEASEIIAKILVRdPSTRITs---------QELMA 360 nematode
AAC68917  250 DMseYLVFRRIQ-----DILYTFSEDfp----------------dENAKNLIERLLVKeQKSRLTs---------QEIKE 299 nematode
XP_628089 254 APseFLVFCRVF-----QNGLRFPPDf-----------------pKDAKLLVESLLKQePSERATi---------EEVKK 302 Cryptosporidium pa...
XP_762966 268 GSteYFIIDRVR-----KFDLSFPPSi-----------------nPDAKDLILSLLRD-PEDRLGf---------DQIRA 315 Theileria parva st...
XP_742672 356 GSteWFIYNKIK-----KREINYPPIi-----------------pLDLVDLIEKLITInPECRLGfkn-----gcEDVLQ 408 Plasmodium chabaud...
CAJ06102  352 GMtqFEVLQKVVhgtyvERQELFPRInfaddadgeaeqccggrrfAAVKDFIQRLLLTdPQKRLGvhpdthrfdaTALRR 431 Leishmania major
CAK66678  289 GKsdYLVFQQAL-----ETELQFPEGwi---------------dnEQFRSLIRKMLQKdSQDRPTl---------AEIMQ 339 Paramecium tetraur...
CAK76726  245 DStqYLVFQNVK-----NAQLKIPENi-----------------pKVAANLIQQILVRnPQERLGsq------smADLKS 296 Paramecium tetraur...
CAK91661  248 SDneFQLFHNIS-----QCEWEQDQRi-----------------pNDALELIKILLDRnPQNRFYgdlndsdynyDSLKK 305 Paramecium tetraur...
Feature 1         
1H1W_A    269 HPFF 272 human
Q9Y1J3    361 HKFF 364 nematode
AAC68917  300 HKFF 303 nematode
XP_628089 303 SKFF 306 Cryptosporidium parvum Iowa II
XP_762966 316 HPFL 319 Theileria parva strain Muguga
XP_742672 409 HPYF 412 Plasmodium chabaudi chabaudi
CAJ06102  432 HALF 435 Leishmania major
CAK66678  340 DQLW 343 Paramecium tetraurelia
CAK76726  297 HPFF 300 Paramecium tetraurelia
CAK91661  306 HPFF 309 Paramecium tetraurelia
Q9Y1J3    361 HKFF 364 nematode
AAC68917  300 HKFF 303 nematode
XP_628089 303 SKFF 306 Cryptosporidium parvum Iowa II
XP_762966 316 HPFL 319 Theileria parva strain Muguga
XP_742672 409 HPYF 412 Plasmodium chabaudi chabaudi
CAJ06102  432 HALF 435 Leishmania major
CAK66678  340 DQLW 343 Paramecium tetraurelia
CAK76726  297 HPFF 300 Paramecium tetraurelia
CAK91661  306 HPFF 309 Paramecium tetraurelia

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