1FGI,1OEC


Conserved Protein Domain Family
PTKc_FGFR

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cd05053: PTKc_FGFR (this model, PSSM-Id:173634 is obsolete and has been replaced by 270646)
Click on image for an interactive view with Cn3D
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer.
Statistics
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PSSM-Id: 173634
Aligned: 9 rows
Threshold Bit Score: 553.176
Created: 17-Jul-2006
Updated: 17-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:Based on the structures of other PTK family members bound to substrate peptides and ATP analogs as well as, the structures of human FGFR1 and FGFR2tyr kinase bound to Su5402 inhibitor inhibitor and 4-aryl-2-phenylamino pyrimidine inhibitor (1FGI_A and 1OEC_A respectively).
  • Citation:PMID 9312016
  • Citation:PMID 9139660

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                       # #####   #                   # #                              
1FGI_A      10 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGldkdkpnRVTKVAVKMLKSDatekDLSDLISEMEMMKMIgKHKNI 89   human
Q61851     453 LPADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGidkdrtaKPVTVAVKMLKDDatdkDLSDLVSEMEMMKMIgKHKNI 532  house mouse
Q03142     451 LPLDPLWEFPRDRLVLGKPLGEGCFGQVVRAEAFGmdpsrpdQTSTVAVKMLKDNasdkDLADLVSEMEVMKLIgRHKNI 530  house mouse
1OEC_A      16 LPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGidkdkpkEAVTVAVKMLKDDatekDLSDLVSEMEMMKMIgKHKNI 95   human
NP_999702  626 IPLDPEWEFPRDRLTVGKTIGEGAFGKVVIGEAVGivc--qeKTSTVAVKMLKANamdrEFSDLISELAMMKMIgKNPNI 703  purple urchin
AAO39416   461 IAPDPAWEIKLEQLETDCLLGEGAFGRVFRATARDlpn--htGVQTVAVKMLKEDcceqDLKDFISEIEVMKSIgKHINI 538  Hydra vulgaris
ABN70839   261 LPLDEEWELDRSQISLLGILGEGAFGRVVKADAIGlpn--mpYRCNVAVKMLXEDatehELADLVSEMEVMKTIgQHVNI 338  starlet sea anemone
Q10656     627 VDSDPVWEVERSKLSLVHMLGEGAFGEVWKATYKEte----nNEIAVAVKKLKMSahekELIDLVSEMETFKVIgEHENV 702  Caenorhabditis e...
Q95YM9     369 IQLDLQWELQREDITLVERLDEGFFGQVFKADLVTcnn-trkEKMVCAVKMLKGNrnekDVLDLLTEMDQMKRVgKHKNI 447  Halocynthia roretzi
Feature 1                      ##### ##                                                        
1FGI_A      90 INLLGACTqdgPLYVIVEYASKGNLREYLQARRPpgleysyn----------------pshnpeeqLSSKDLVSCAYQVA 153  human
Q61851     533 INLLGACTqggPLYVLVEYAAKGNLREFLRARRPpgmdysfd----------------acrlpeeqLTCKDLVSCAYQVA 596  house mouse
Q03142     531 INLLGVCTqegPLYVIVECAAKGNLREFLRARRPpgpdlspd----------------gprssegpLSFPALVSCAYQVA 594  house mouse
1OEC_A      96 INLLGACTqdgPLYVIVEYASKGNLREYLRARRPpgmeysyd----------------inrvpeeqMTFKDLVSCTYQLA 159  human
NP_999702  704 INLLGCCTqegPPYVIVEFAHHGNLRDFLRSRRPpeeyeksi-----------------llttsqtLTNKDLMSMAYQVA 766  purple urchin
AAO39416   539 LNLLAVSSqqgKLYIVVEYCRHGNLRSFLKDNRPvmqans---------------------vitkkITLYDLTSFCLQVA 597  Hydra vulgaris
ABN70839   339 INLIGACTqkgPLFVVVEYASQGNLRQFLRARRPipeyanpl-----------------tepprekLKLVDLVSFSYQVA 401  starlet sea anemone
Q10656     703 LRLIGCCTgagPLYVVVELCKHGNLRDFLRAHRPkeekakkssqeltdyleprkasdkddielipnLTQRHLVQFAWQVA 782  Caenorhabditis e...
Q95YM9     448 INLLGVCTqngPLWLVIEYAAQGNLRDYLRRNRPqntlcnlvlpsegr-----npddelpvphgdtLTQKDIVSFAFQVA 522  Halocynthia roretzi
Feature 1                    #   ## #          #                 #####        #                
1FGI_A     154 RGMEYLASKKCIHRDLAARNVLVTEdNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDrIYTHQSDVWSFGV 233  human
Q61851     597 RGMEYLASQKCIHRDLAARNVLVTEdNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDrVYTHQSDVWSFGV 676  house mouse
Q03142     595 RGMQYLESRKCIHRDLAARNVLVTEdDVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDrVYTHQSDVWSFEI 674  house mouse
1OEC_A     160 RGMEYLASQKCIHRDLAARNVLVTEnNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDrVYTHQSDVWSFGV 239  human
NP_999702  767 RGMDFLASKKCIHRDLAARNVLVTEdFEMKICDFGLARDIHYIDFYRKTTDGRLPVKWMAPEALFDrMFTTQSDVWSFGI 846  purple urchin
AAO39416   598 RGMNFLASKKCIHRDIAARNVLVGEgYLMKIADFGLARDIHEQDYYRKCTDGRLPVKWMAIEALFDrVYTTQSDIWSFGI 677  Hydra vulgaris
ABN70839   402 RGMEYLESKKCIHRDLAARNVLVSDnHVIKIADFGLARDIHDIDYYRKTTDGRLPVKWMALEALFDrVYTAQSDVWAYGI 481  starlet sea anemone
Q10656     783 QGMNFLASKKIIHRDLAARNVLVGDgHVLKISDFGLSRDVHCNDYYRKRGNGRLPIKWMALEALDSnVYTVESDVWSYGV 862  Caenorhabditis e...
Q95YM9     523 RGLEFLAQKKCIHRDLAARNVLVTEeLVMKIADFGLARDIRSCDYYRKHTRGHLPYKWMALEAMSDnIFTHATDVWSFGV 602  Halocynthia roretzi
Feature 1                        #                                                     
1FGI_A     234 LLWEIFTL-GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAvPSQRPTFKQLVEDLDRIVA 304  human
Q61851     677 LLWEIFTPgGPSPYPGIPVEELFKLLKEGHRMDKPASCTHDLYMIMRECWHAvPSQRPTFKQLVEDLDRILT 748  house mouse
Q03142     675 LLWEIFTL-GGSPYPGIPVEELFSLLREGHRMERPPNCPSELYGLMRECWHAaPSQRPTFKQLVEALDKVLL 745  house mouse
1OEC_A     240 LMWEIFTL-GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAvPSQRPTFKQLVEDLDRILT 310  human
NP_999702  847 LLWEIMTL-GGTPYPSVPVEQMFDYLRSGKRLEKPQNTSLEIYHILCECWRTsPGQRPTFCELVEDLDRIIS 917  purple urchin
AAO39416   678 LAWEIVTF-GGSPYPGIALEKLFDLLKQGYRMERPLNCTDDMYTLMLNCWKEiPSKRPTFSQLIEDLERMLL 748  Hydra vulgaris
ABN70839   482 LMWEIVTF-GGSPYPGIPLWKLFELLKEGYRMEQPVNCQDDVYALMLRCWHEnPNQRPTFAEIVKEMDAKLT 552  starlet sea anemone
Q10656     863 LLWEIMTL-GGTPYPTIAMPELYANLKEGYRMEPPHLCPQEVYHLMCSCWREkLEERPSFKTIVDYLDWMLT 933  Caenorhabditis elegans
Q95YM9     603 LLWEIFSL-AGSPYPGIKTHELVKFLRSGERLDKPQYASQEMYRLMRDCWEEdPSKRPNFRTLVEDLDRMLA 673  Halocynthia roretzi

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