1FGI,1MQB,1FVR,1Y6B,1XBC,1U54,2P0C,1K3A,1LUF,1MP8,1M17,1YVJ,1SM2,1BYG,2IVV,1RJB,1R0P,2G2F,1IR3,1M7N,1Y57,3CD3,2SRC


Conserved Protein Domain Family
PTKc

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cd00192: PTKc (this model, PSSM-Id:173624 is obsolete and has been replaced by 270623)
Click on image for an interactive view with Cn3D
Catalytic domain of Protein Tyrosine Kinases
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.
Statistics
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PSSM-Id: 173624
Aligned: 111 rows
Threshold Bit Score: -1
Created: 1-Nov-2000
Updated: 17-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 26 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1K3A; Human IGF-1R tyr kinase binds AMP-PCP and substrate IRS-1 peptide; defined at 3.5A contacts.
    View structure with Cn3D
  • Structure:1IR3; Human InsR tyr kinase binds ATP analog and peptide substrate; defined at 3.5A contacts.
    View structure with Cn3D
  • Citation:PMID 9312016
  • Structure:2G2F_A; Human Abl tyr kinase binds peptide substrate and thiophosphoric acid; defined at 3.5A contacts.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #####   #                   # #                                               
1FGI_A      27 KPLGEGAFGQVVLAEAigldkdkpnrvTKVAVKMLKSDatek--dlsdLISEMEMMKMIgkHKNIINLLGACtq--dgPL 102  human
1K3A_A      16 RELGQGSFGMVYEGVAkgvvk--depeTRVAIKTVNEAasmr--erieFLNEASVMKEFn-CHHVVRLLGVVsq--gqPT 88   human
O60674     549 ESLGQGTFTKIFKGVRrevgdygqlheTEVLLKVLDKAhrn----yseSFFEAASMMSKlsHKHLVLNYGVCvc--gdEN 622  human
XP_651735  430 EKLGNGAFGVVCKGMWlg--------tTPVAMKAIDGAldkpe-klqeIIKEAYVTQLMk-HPNVITMYGLYkn--eeSL 497  Entamoeba histol...
NP_494971  199 VNLGSGQYGCVAIGAYr---------rRLVAIKKLTSSgerllldreaLLKEAMFMQKLq-HPYITKIIGISid--ktPP 266  nematode
NP_498153  527 DQIGKGAFGTVKKGKFrnsl----gesVPVAVKKLGLResskd-ernpAFSEMEILEMVa-HPNIVFYYGFSisgdeqAL 600  nematode
P83097     497 DVIGDGRFGEIITGKVstn-----dfaRDCTLHVLCLDdlngt-tqaqLLRELRQLSQLkrQEHLLDFYGVSas--pdWF 568  fruit fly
XP_973940  432 NLLGIGRFGRVNSGSIyen-----stlIPVAVYSIQDKklsad-dkknMLRDLDVLIKTrkHDNVIALVGTCet--sqMV 503  red flour beetle
XP_651734  439 EKLGNGAFGVVCKGMWlg--------tTPVAMKAVNGAldkpe-klieLEKEATITQLMk-HPNLITMYGLYke--kdTI 506  Entamoeba histol...
AAB94183    68 ITVGMGKFGPIHRAMFssfn----gsvHDVNVYLLKNIarlsdeelvkLTSLLKSNIAAgaHQNVVSLCGVSps--gsDV 141  nematode
1K3A_A      16 RELGQGSFGMVYEGVAkgvvk--depeTRVAIKTVNEAasmr--erieFLNEASVMKEFn-CHHVVRLLGVVsq--gqPT 88   human
O60674     549 ESLGQGTFTKIFKGVRrevgdygqlheTEVLLKVLDKAhrn----yseSFFEAASMMSKlsHKHLVLNYGVCvc--gdEN 622  human
XP_651735  430 EKLGNGAFGVVCKGMWlg--------tTPVAMKAIDGAldkpe-klqeIIKEAYVTQLMk-HPNVITMYGLYkn--eeSL 497  Entamoeba histol...
NP_494971  199 VNLGSGQYGCVAIGAYr---------rRLVAIKKLTSSgerllldreaLLKEAMFMQKLq-HPYITKIIGISid--ktPP 266  nematode
NP_498153  527 DQIGKGAFGTVKKGKFrnsl----gesVPVAVKKLGLResskd-ernpAFSEMEILEMVa-HPNIVFYYGFSisgdeqAL 600  nematode
P83097     497 DVIGDGRFGEIITGKVstn-----dfaRDCTLHVLCLDdlngt-tqaqLLRELRQLSQLkrQEHLLDFYGVSas--pdWF 568  fruit fly
XP_973940  432 NLLGIGRFGRVNSGSIyen-----stlIPVAVYSIQDKklsad-dkknMLRDLDVLIKTrkHDNVIALVGTCet--sqMV 503  red flour beetle
XP_651734  439 EKLGNGAFGVVCKGMWlg--------tTPVAMKAVNGAldkpe-klieLEKEATITQLMk-HPNLITMYGLYke--kdTI 506  Entamoeba histol...
AAB94183    68 ITVGMGKFGPIHRAMFssfn----gsvHDVNVYLLKNIarlsdeelvkLTSLLKSNIAAgaHQNVVSLCGVSps--gsDV 141  nematode
Feature 1         ####  ##                                                        #   ## #     
1FGI_A     103 YVIVEYAsKGNLREYLqarrppgleysynpshnpeeqLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEd- 179  human
1K3A_A      89 LVIMELMtRGDLKSYLrslrpeme------nnpvlapPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEd- 159  human
O60674     623 ILVQEFVkFGSLDTYLkkn---------------kncINILWKLEVAKQLAWAMHFLEE--NTLIHGNVCAKNILLIRee 685  human
XP_651735  498 FMVIDLA-EGCLLDYVqnkggk---------ypesktMTFKDYVRCAMDVASGMAYLES--QKIVHRDLALRNVLYIHdk 565  Entamoeba histol...
NP_494971  267 MLLIELM-ACPLLDHLqky---------------gkyTTIGEKLLYLWQLARGLSFMAK--ENVVHRDIAARNVLFSRh- 327  nematode
NP_498153  601 YLLFELM-DTSLDKFIdks---------------daiLSENERLDILAQICRGMSFLHTrtPSIVHGDLAARNVLLKKhp 664  nematode
P83097     569 YLIFEQQ-RMSLKRKLvesrlma-------psprltsLSEQLVLQWIYELASAMNYLSS--CQVVHRQLCSHSVFVTSd- 637  fruit fly
XP_973940  504 FVVLEYV-SMNLKDLLlgsrdsl--------pgkfsnMTENQALDIAINVAKGMSHLAS--NKIIHKQLCARNVMVANg- 571  red flour beetle
XP_651734  507 FMILDLA-EGSLDKLMsrenpk----------neranITFKKQIKMAIDCASGMAYLES--LRIVHRDLALRNLLYIHdd 573  Entamoeba histol...
AAB94183   142 MLMWEPLhQSVLRGVLresrcarfg---tepfnmasfLSSERLAAIAIGCCNGVEHLLK--KNVFPPHLSTSNVLLAEr- 215  nematode
1K3A_A      89 LVIMELMtRGDLKSYLrslrpeme------nnpvlapPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEd- 159  human
O60674     623 ILVQEFVkFGSLDTYLkkn---------------kncINILWKLEVAKQLAWAMHFLEE--NTLIHGNVCAKNILLIRee 685  human
XP_651735  498 FMVIDLA-EGCLLDYVqnkggk---------ypesktMTFKDYVRCAMDVASGMAYLES--QKIVHRDLALRNVLYIHdk 565  Entamoeba histol...
NP_494971  267 MLLIELM-ACPLLDHLqky---------------gkyTTIGEKLLYLWQLARGLSFMAK--ENVVHRDIAARNVLFSRh- 327  nematode
NP_498153  601 YLLFELM-DTSLDKFIdks---------------daiLSENERLDILAQICRGMSFLHTrtPSIVHGDLAARNVLLKKhp 664  nematode
P83097     569 YLIFEQQ-RMSLKRKLvesrlma-------psprltsLSEQLVLQWIYELASAMNYLSS--CQVVHRQLCSHSVFVTSd- 637  fruit fly
XP_973940  504 FVVLEYV-SMNLKDLLlgsrdsl--------pgkfsnMTENQALDIAINVAKGMSHLAS--NKIIHKQLCARNVMVANg- 571  red flour beetle
XP_651734  507 FMILDLA-EGSLDKLMsrenpk----------neranITFKKQIKMAIDCASGMAYLES--LRIVHRDLALRNLLYIHdd 573  Entamoeba histol...
AAB94183   142 MLMWEPLhQSVLRGVLresrcarfg---tepfnmasfLSSERLAAIAIGCCNGVEHLLK--KNVFPPHLSTSNVLLAEr- 215  nematode
Feature 1                   #                 #####        #                                   
1FGI_A     180 -------NVMKIADFGLARDihhidyykkttNGRLPVKWMAPEALFDr-----IYTHQSDVWSFGVLLWEIFTLgGSPYP 247  human
1K3A_A     160 -------FTVKIGDFGMTRDixetdxxrkggKGLLPVRWMSPESLKDg-----VFTTYSDVWSFGVVLWEIATLaEQPYQ 227  human
O60674     686 drktgnpPFIKLSDPGISITvlp------kdILQERIPWVPPECIENp----kNLNLATDKWSFGTTLWEICSGgDKPLS 755  human
XP_651735  566 -----lgIRGKVADLGLSRKsetgeyaakstAKTMPIRWTAPEAAARg-----IFTIKNDVWAYGITLWELFTKgKLPYS 635  Entamoeba histol...
NP_494971  328 -------GIVKVSDLGLSDYesklq-avntsKERLPRAWLPPESVSKtg--gnKFNEKTDVWMFGATSVEVFQNgQPPYH 397  nematode
NP_498153  665 vy--ikkYICKITDLGLAKTcldelytsyddPTKIPFKWLPPEVLGSr-----TLSLKTDIWAFGIVCFEVCDKvGEPYG 737  nematode
P83097     638 -------FKLKLSVFGPLPYmni------arQQPDHNRWLAPEVLRHq----hHHSTRSDVWSLACVAWECCALgGTPYA 700  fruit fly
XP_973940  572 -------FIPKISGYGLSQFys-------hnNLPDYTRWTAMEVFKGq-----AHNLKSDVWSFGCLLWEICVLgGTPYG 632  red flour beetle
XP_651734  574 k----ggYITKIADLGLSRQtadgn--yttqSKIFPKRWTAPEAGDPnspsylQFNTKSDVWSYGVVFWEILTKgIIPYS 647  Entamoeba histol...
AAB94183   216 -------GIVKIGGFGLAEHhald---mtteSAPTKLRWMPPEYFKRdq--kmIYNEQTMIWPLGVTLWEIFSLgGTPFG 283  nematode
1K3A_A     160 -------FTVKIGDFGMTRDixetdxxrkggKGLLPVRWMSPESLKDg-----VFTTYSDVWSFGVVLWEIATLaEQPYQ 227  human
O60674     686 drktgnpPFIKLSDPGISITvlp------kdILQERIPWVPPECIENp----kNLNLATDKWSFGTTLWEICSGgDKPLS 755  human
XP_651735  566 -----lgIRGKVADLGLSRKsetgeyaakstAKTMPIRWTAPEAAARg-----IFTIKNDVWAYGITLWELFTKgKLPYS 635  Entamoeba histol...
NP_494971  328 -------GIVKVSDLGLSDYesklq-avntsKERLPRAWLPPESVSKtg--gnKFNEKTDVWMFGATSVEVFQNgQPPYH 397  nematode
NP_498153  665 vy--ikkYICKITDLGLAKTcldelytsyddPTKIPFKWLPPEVLGSr-----TLSLKTDIWAFGIVCFEVCDKvGEPYG 737  nematode
P83097     638 -------FKLKLSVFGPLPYmni------arQQPDHNRWLAPEVLRHq----hHHSTRSDVWSLACVAWECCALgGTPYA 700  fruit fly
XP_973940  572 -------FIPKISGYGLSQFys-------hnNLPDYTRWTAMEVFKGq-----AHNLKSDVWSFGCLLWEICVLgGTPYG 632  red flour beetle
XP_651734  574 k----ggYITKIADLGLSRQtadgn--yttqSKIFPKRWTAPEAGDPnspsylQFNTKSDVWSYGVVFWEILTKgIIPYS 647  Entamoeba histol...
AAB94183   216 -------GIVKIGGFGLAEHhald---mtteSAPTKLRWMPPEYFKRdq--kmIYNEQTMIWPLGVTLWEIFSLgGTPFG 283  nematode
Feature 1           #                                                              
1FGI_A     248 Gv--pVEELFKLLKe----GHRMDKPSNc------tNELYMMMRD-CWHAvPSQRPTF--KQLVEDLD 300  human
1K3A_A     228 Gl--sNEQVLRFVMe----GGLLDKPDNc------pDMLLELMRM-CWQYnPKMRPSF--LEIISSIK 280  human
O60674     756 Al--dSQRKLQFYEd----RHQLPAPKW--------AELANLINN-CMDYePDFRPSF--RAIIRDLN 806  human
XP_651735  636 Al--kKEDVIPSVNa----GLRLEKPDYl------kHPIQTINRGtCKEEiSEDDGYGetQEEVSKPT 691  Entamoeba histolytica HM-1:IMSS
NP_494971  398 El--kWKEALPRLQnfkdgDNLLVFPKYa------sSEIHAFYSTkVFKRvNEDRVNF--EEITSVLD 455  nematode
NP_498153  738 Acv-pTSNLCQYLTd----GYVHEKGLHm------sDTIYNIALD-CMRQhPIERPSF--AELVDQFL 791  nematode
P83097     701 NavasNQQLLEAIRa----AVRPAQPAYv------yGDLYQLLLN-CWQLePSERSSC--EDVAFGVR 755  fruit fly
XP_973940  633 Nf--sNNEIPERIIk----GLRLPQMQYf------sDELYQFMLS-CWQIdMDERPDF--DVLLESLQ 685  red flour beetle
XP_651734  648 Sis-kAQDALDAVIk----GLRLEKPTIleengsvgDKVWEVITS-CFNS-PDKRPRF--RDCFKSLT 706  Entamoeba histolytica HM-1:IMSS
AAB94183   284 Slr-qAQTFIDAMRd----GSAQLDPISyc-----gEAVTQLLAT-CTSHvPEARGDI--RTIIKRLE 338  nematode
1K3A_A     228 Gl--sNEQVLRFVMe----GGLLDKPDNc------pDMLLELMRM-CWQYnPKMRPSF--LEIISSIK 280  human
O60674     756 Al--dSQRKLQFYEd----RHQLPAPKW--------AELANLINN-CMDYePDFRPSF--RAIIRDLN 806  human
XP_651735  636 Al--kKEDVIPSVNa----GLRLEKPDYl------kHPIQTINRGtCKEEiSEDDGYGetQEEVSKPT 691  Entamoeba histolytica HM-1:IMSS
NP_494971  398 El--kWKEALPRLQnfkdgDNLLVFPKYa------sSEIHAFYSTkVFKRvNEDRVNF--EEITSVLD 455  nematode
NP_498153  738 Acv-pTSNLCQYLTd----GYVHEKGLHm------sDTIYNIALD-CMRQhPIERPSF--AELVDQFL 791  nematode
P83097     701 NavasNQQLLEAIRa----AVRPAQPAYv------yGDLYQLLLN-CWQLePSERSSC--EDVAFGVR 755  fruit fly
XP_973940  633 Nf--sNNEIPERIIk----GLRLPQMQYf------sDELYQFMLS-CWQIdMDERPDF--DVLLESLQ 685  red flour beetle
XP_651734  648 Sis-kAQDALDAVIk----GLRLEKPTIleengsvgDKVWEVITS-CFNS-PDKRPRF--RDCFKSLT 706  Entamoeba histolytica HM-1:IMSS
AAB94183   284 Slr-qAQTFIDAMRd----GSAQLDPISyc-----gEAVTQLLAT-CTSHvPEARGDI--RTIIKRLE 338  nematode

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