Conserved Protein Domain Family
STKc_CDKL

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cd07833: STKc_CDKL (this model, PSSM-Id:143338 is obsolete and has been replaced by 270827)
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory.
Statistics
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PSSM-Id: 143338
Aligned: 11 rows
Threshold Bit Score: -1
Created: 1-Aug-2006
Updated: 17-Jan-2013
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:
  • Comment:based on the structure of human CDK2 bound with ATP and substrate peptide, and on the structures of other CDKs or MAPKs, bound with ATP or ATP analogs
  • Citation:PMID 9739089

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 ####    #              # #                                  #           
Q00532          2 EKYEKIGkIGEGSYGVVFKCRNRDt--gQIVAIKKFLEsed------------------dpvIKKIALREIRMLKQLk-H 60   human
4505569         2 EKYENLGlVGEGSYGMVMKCRNKDt--gRIVAIKKFLEsdd------------------dkmVKKIAMREIKLLKQLr-H 60   human
O76039         11 NKFEILGvVGEGAYGVVLKCRHKEt--hEIVAIKKFKDsee------------------neeVKETTLRELKMLRTLk-Q 69   human
AAG49589        2 DAYETLGmLGEGTYGVVVKARHRAt--sRIVAIKKYKQaed------------------ddhVRKTSLREVRVLKQLr-H 60   Trypanosoma b...
XP_667043      11 NRYKTICeIGEGAFGVVFKCMDLVt--nEIVALKEFKTiysdenensyvtknsangkvntniSHNKILREIATLRRLygQ 88   Cryptosporidi...
CAK68918        2 NKYEVLGvVGEGAYGVVLKCKNKEt--nEIVAIKKFKEted------------------neiVKKSIQREVKVLRLLr-H 60   Paramecium te...
XP_001703331    1 QKYEFLSrTGEGAYGSVWRARDKNt--gMMVAVKKMKDvpt------------------teeVREIAMREVRVLQLAk-H 59   Chlamydomonas...
XP_001703541 1460 GKYEVQHvVGEGAYGMVMKCKVRAteppQWVAIKEFKIedsdp---------------daedVKRTSLREVSVLEALh-H 1523 Chlamydomonas...
EEE22847        2 NKYEKLElVGEGAYGVVLKCRRKDt--gELVAIKTFKGnee------------------stnVKKTIARELNALTHLr-H 60   Toxoplasma go...
EEH54868        2 NKYEVVGvVGEGAYGVVLKCRNKEt--gDVVAVKKFKArrgd----------------ddeaVKKTTLREVKVLRSLe-H 62   Micromonas pu...
XP_001689794    2 QNYEYVStIGEGAYGEVWQCREKAt--gRIVAVKGFKAahe------------------dkdIMRLAVREVKVLQAVs-H 60   Chlamydomonas...
4505569         2 EKYENLGlVGEGSYGMVMKCRNKDt--gRIVAIKKFLEsdd------------------dkmVKKIAMREIKLLKQLr-H 60   human
O76039         11 NKFEILGvVGEGAYGVVLKCRHKEt--hEIVAIKKFKDsee------------------neeVKETTLRELKMLRTLk-Q 69   human
AAG49589        2 DAYETLGmLGEGTYGVVVKARHRAt--sRIVAIKKYKQaed------------------ddhVRKTSLREVRVLKQLr-H 60   Trypanosoma b...
XP_667043      11 NRYKTICeIGEGAFGVVFKCMDLVt--nEIVALKEFKTiysdenensyvtknsangkvntniSHNKILREIATLRRLygQ 88   Cryptosporidi...
CAK68918        2 NKYEVLGvVGEGAYGVVLKCKNKEt--nEIVAIKKFKEted------------------neiVKKSIQREVKVLRLLr-H 60   Paramecium te...
XP_001703331    1 QKYEFLSrTGEGAYGSVWRARDKNt--gMMVAVKKMKDvpt------------------teeVREIAMREVRVLQLAk-H 59   Chlamydomonas...
XP_001703541 1460 GKYEVQHvVGEGAYGMVMKCKVRAteppQWVAIKEFKIedsdp---------------daedVKRTSLREVSVLEALh-H 1523 Chlamydomonas...
EEE22847        2 NKYEKLElVGEGAYGVVLKCRRKDt--gELVAIKTFKGnee------------------stnVKKTIARELNALTHLr-H 60   Toxoplasma go...
EEH54868        2 NKYEVVGvVGEGAYGVVLKCRNKEt--gDVVAVKKFKArrgd----------------ddeaVKKTTLREVKVLRSLe-H 62   Micromonas pu...
XP_001689794    2 QNYEYVStIGEGAYGEVWQCREKAt--gRIVAVKGFKAahe------------------dkdIMRLAVREVKVLQAVs-H 60   Chlamydomonas...
Feature 1            #                ####  # ##                                    # # ## #      
Q00532         61 PNLVNLLEVFRr-kRRLHLVFEYCDHTVLHELDRyqrGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITk--- 136  human
4505569        61 ENLVNLLEVCKk-kKRWYLVFEFVDHTILDDLELfpnGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSq--- 136  human
O76039         70 ENIVELKEAFRr-rGKLYLVFEYVEKNMLELLEEmpnGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISh--- 145  human
AAG49589       61 PNVIALLDVFRr-dGKLYLVFEYVENTILQLIEEkkyGLSPDEVRRYTFQLLNGVSYCHAHNIIHRDVKPENILVSr--- 136  Trypanosoma b...
XP_667043      89 KNIIQLKDFFLh-eNRYYLSLEYFPQTLLQYLEKspkGLPIEIIRSSIYQLLTALKKCHSMGIIHRDVKPENILIKeiek 167  Cryptosporidi...
CAK68918       61 LNIVELKEAFKr-kGRIYLVFEYVERNLLEVLEAspsGLEPLYIKKTIFQLLKAIYCCHQHDIVHRDIKPENLLISn--- 136  Paramecium te...
XP_001703331   60 VNIVNLLEAYKsqsGRLYLVFEYVERTLLQELKAnrgGMPPAAVKSLTWQLLQSLSYLHRKQIIHRDVKPSNILITe--- 136  Chlamydomonas...
XP_001703541 1524 PHVVGFVDKFMv-gDRLFIVMEFLPCNLLELLEAqpgGMDRDAVRLIMFQLCSAIAFIHSKKMVYRDIKPENLLVDe--- 1599 Chlamydomonas...
EEE22847       61 ENIVALKEAFRw-kGKLHLVFEYIHRNLLELLEAspaGLDPETVRLCIWQLVKALSYCHRNDIVHRDVKPENLLVNlk-- 137  Toxoplasma go...
EEH54868       63 ENVVSLKEAFRr-kGKLYLVFEYVEKNLLEVLEErpgGLSPDTTRRYVWQLARAVAHCHRLGIVHRDIKPENLLVNprs- 140  Micromonas pu...
XP_001689794   61 ENLVRLINAFKsksGRVYMVFEFAGSSVHDQLDRyptGLGAAATKLLSWQLLQAAAYLHGNKVLHRDIKPANILVDs--- 137  Chlamydomonas...
4505569        61 ENLVNLLEVCKk-kKRWYLVFEFVDHTILDDLELfpnGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSq--- 136  human
O76039         70 ENIVELKEAFRr-rGKLYLVFEYVEKNMLELLEEmpnGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISh--- 145  human
AAG49589       61 PNVIALLDVFRr-dGKLYLVFEYVENTILQLIEEkkyGLSPDEVRRYTFQLLNGVSYCHAHNIIHRDVKPENILVSr--- 136  Trypanosoma b...
XP_667043      89 KNIIQLKDFFLh-eNRYYLSLEYFPQTLLQYLEKspkGLPIEIIRSSIYQLLTALKKCHSMGIIHRDVKPENILIKeiek 167  Cryptosporidi...
CAK68918       61 LNIVELKEAFKr-kGRIYLVFEYVERNLLEVLEAspsGLEPLYIKKTIFQLLKAIYCCHQHDIVHRDIKPENLLISn--- 136  Paramecium te...
XP_001703331   60 VNIVNLLEAYKsqsGRLYLVFEYVERTLLQELKAnrgGMPPAAVKSLTWQLLQSLSYLHRKQIIHRDVKPSNILITe--- 136  Chlamydomonas...
XP_001703541 1524 PHVVGFVDKFMv-gDRLFIVMEFLPCNLLELLEAqpgGMDRDAVRLIMFQLCSAIAFIHSKKMVYRDIKPENLLVDe--- 1599 Chlamydomonas...
EEE22847       61 ENIVALKEAFRw-kGKLHLVFEYIHRNLLELLEAspaGLDPETVRLCIWQLVKALSYCHRNDIVHRDVKPENLLVNlk-- 137  Toxoplasma go...
EEH54868       63 ENVVSLKEAFRr-kGKLYLVFEYVEKNLLEVLEErpgGLSPDTTRRYVWQLARAVAHCHRLGIVHRDIKPENLLVNprs- 140  Micromonas pu...
XP_001689794   61 ENLVRLINAFKsksGRVYMVFEFAGSSVHDQLDRyptGLGAAATKLLSWQLLQAAAYLHGNKVLHRDIKPANILVDs--- 137  Chlamydomonas...
Feature 1                  #  #                                # #### #                           
Q00532        137 --hSVIKLCDFGFARLLAGPSd---------------------YYTDYVATRWYRSPELLVGdt-----------qYGPP 182  human
4505569       137 --sGVVKLCDFGFARTLAAPGe---------------------VYTDYVATRWYRAPELLVGdv-----------kYGKA 182  human
O76039        146 --nDVLKLCDFGFARNLSEGNn--------------------aNYTEYVATRWYRSPELLLGa------------pYGKS 191  human
AAG49589      137 --dGVLKLCDFGFARQLSCRG----------------------NYTEYVATRWYRAPELLVGdv-----------sYGKA 181  Trypanosoma b...
XP_667043     168 nmnLELKLCDFGFARFIQQNKsysnqfkdslsksvdslcvasrPLTSYVSTRWYRAPELLVKst-----------eYGPG 236  Cryptosporidi...
CAK68918      137 --aSVLKLCDFGFARSLTAQTq---------------------DLTDYVATRWYRAPELLLSys-----------nYDKG 182  Paramecium te...
XP_001703331  137 --sGVLKICDFGFARAMTSSSad-------------------pAYTTYVVTRWYRAPEVLVGd------------nYGPP 183  Chlamydomonas...
XP_001703541 1600 --hGTVKLCDFGFARYLPGRPt--------------------sHLTDYVATRWYRAPELLLGppyrdaqgkhiqfmYGPP 1657 Chlamydomonas...
EEE22847      138 --tRKLKLCDFGFARQLHESAa--------------------vPLTDYVATRWYRSPELLLCdp-----------eYGKP 184  Toxoplasma go...
EEH54868      141 draNALKLCDFGFARPLRAKAgra-----------------asPLTDYVATRWYRAPELLLGst-----------sYGFE 192  Micromonas pu...
XP_001689794  138 --sGVAKLCDFGFARAVRCGPre------------------aqRCTSYVVTRWYRAPEVLVSd------------nYGAA 185  Chlamydomonas...
4505569       137 --sGVVKLCDFGFARTLAAPGe---------------------VYTDYVATRWYRAPELLVGdv-----------kYGKA 182  human
O76039        146 --nDVLKLCDFGFARNLSEGNn--------------------aNYTEYVATRWYRSPELLLGa------------pYGKS 191  human
AAG49589      137 --dGVLKLCDFGFARQLSCRG----------------------NYTEYVATRWYRAPELLVGdv-----------sYGKA 181  Trypanosoma b...
XP_667043     168 nmnLELKLCDFGFARFIQQNKsysnqfkdslsksvdslcvasrPLTSYVSTRWYRAPELLVKst-----------eYGPG 236  Cryptosporidi...
CAK68918      137 --aSVLKLCDFGFARSLTAQTq---------------------DLTDYVATRWYRAPELLLSys-----------nYDKG 182  Paramecium te...
XP_001703331  137 --sGVLKICDFGFARAMTSSSad-------------------pAYTTYVVTRWYRAPEVLVGd------------nYGPP 183  Chlamydomonas...
XP_001703541 1600 --hGTVKLCDFGFARYLPGRPt--------------------sHLTDYVATRWYRAPELLLGppyrdaqgkhiqfmYGPP 1657 Chlamydomonas...
EEE22847      138 --tRKLKLCDFGFARQLHESAa--------------------vPLTDYVATRWYRSPELLLCdp-----------eYGKP 184  Toxoplasma go...
EEH54868      141 draNALKLCDFGFARPLRAKAgra-----------------asPLTDYVATRWYRAPELLLGst-----------sYGFE 192  Micromonas pu...
XP_001689794  138 --sGVAKLCDFGFARAVRCGPre------------------aqRCTSYVVTRWYRAPEVLVSd------------nYGAA 185  Chlamydomonas...
Feature 1                              #                                                          
Q00532        183 VDVWAIGCVFAELLSgVPLWPGksDVDQLYLIRKTLGDLIP-RHQQVFS-------------------TNQYFSGv---- 238  human
4505569       183 VDVWAIGCLVTEMFMgEPLFPGdsDIDQLYHIMMCLGNLIP-RHQELFN-------------------KNPVFAGv---- 238  human
O76039        192 VDMWSVGCILGELSDgQPLFPGesEIDQLFTIQKVLGPLPS-EQMKLFY-------------------SNPRFHGl---- 247  human
AAG49589      182 VDVWAIGCVFSELSDgQPLFPGdsDLDQLSLIMRACGPVPQ-QMVSTFE-------------------HNALYRRv---- 237  Trypanosoma b...
XP_667043     237 IDVWAVGCIMAELIDgEPLFPGtsDIDQLYLIRNTIGKLDSkSQGILESdkrlydaykkhfyngfisgSNSRYNTelsqs 316  Cryptosporidi...
CAK68918      183 VDMWAIGCLLCELTDgNPLFPGenEMDQLYLIQKMLGPLTP-SQQETFS-------------------KNPRFLGm---- 238  Paramecium te...
XP_001703331  184 VDVWALGCIFAEMLAgRPLFPGknHHDQLWLILKCLGTMTE-RQLELLD-------------------SDPQFACf---- 239  Chlamydomonas...
XP_001703541 1658 VDMWAIGCLMGELLDgEPLFAGdsDLDQLYRVQQILGPMAP-AHQYLFY-------------------ANPHNTG----- 1712 Chlamydomonas...
EEE22847      185 VDMWAVGCIMGELIDgRPLFPGdnEVDQLYKIQLVLGPLLP-QHMEMFR-------------------QNSRFAGl---- 240  Toxoplasma go...
EEH54868      193 VDAWAIGCIMGELIDgQPLFPGesDVDQLYVIQKAMGGLTK-SQTSDFL-------------------RNKRFAGl---- 248  Micromonas pu...
XP_001689794  186 ADIWSIGCTIAEIATgRALFPGrcSTDQLWRIMRCLGPLPP-AHTARLL-------------------SDPRLRG----- 240  Chlamydomonas...
4505569       183 VDVWAIGCLVTEMFMgEPLFPGdsDIDQLYHIMMCLGNLIP-RHQELFN-------------------KNPVFAGv---- 238  human
O76039        192 VDMWSVGCILGELSDgQPLFPGesEIDQLFTIQKVLGPLPS-EQMKLFY-------------------SNPRFHGl---- 247  human
AAG49589      182 VDVWAIGCVFSELSDgQPLFPGdsDLDQLSLIMRACGPVPQ-QMVSTFE-------------------HNALYRRv---- 237  Trypanosoma b...
XP_667043     237 IDVWAVGCIMAELIDgEPLFPGtsDIDQLYLIRNTIGKLDSkSQGILESdkrlydaykkhfyngfisgSNSRYNTelsqs 316  Cryptosporidi...
CAK68918      183 VDMWAIGCLLCELTDgNPLFPGenEMDQLYLIQKMLGPLTP-SQQETFS-------------------KNPRFLGm---- 238  Paramecium te...
XP_001703331  184 VDVWALGCIFAEMLAgRPLFPGknHHDQLWLILKCLGTMTE-RQLELLD-------------------SDPQFACf---- 239  Chlamydomonas...
XP_001703541 1658 VDMWAIGCLMGELLDgEPLFAGdsDLDQLYRVQQILGPMAP-AHQYLFY-------------------ANPHNTG----- 1712 Chlamydomonas...
EEE22847      185 VDMWAVGCIMGELIDgRPLFPGdnEVDQLYKIQLVLGPLLP-QHMEMFR-------------------QNSRFAGl---- 240  Toxoplasma go...
EEH54868      193 VDAWAIGCIMGELIDgQPLFPGesDVDQLYVIQKAMGGLTK-SQTSDFL-------------------RNKRFAGl---- 248  Micromonas pu...
XP_001689794  186 ADIWSIGCTIAEIATgRALFPGrcSTDQLWRIMRCLGPLPP-AHTARLL-------------------SDPRLRG----- 240  Chlamydomonas...
Feature 1                                                            
Q00532        239 -KIPDPEDMEPLELKFPNi-SYPALGLLKGCLHMDPTQRLTCEQLLHHPYF 287  human
4505569       239 -RLPEIKEREPLERRYPKl-SEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 287  human
O76039        248 -RFPAVNHPQSLERRYLGilNSVLLDLMKNLLKLDPADRYLTEQCLNHPTF 297  human
AAG49589      238 -TFPSVDVEETLQQRFPTa-ASPWLEFLTSCLRMDPVERPSCTALMSMAYF 286  Trypanosoma brucei
XP_667043     317 sAVIPPYQIISIKERYEKkvDLIALDFLQKSLTIDPKMRPDCQELLLHPFF 367  Cryptosporidium hominis TU502
CAK68918      239 -KFPEISKPETLEQRYLCklPKRAINFVKGLLKMEPSERLTCRQALKHQYF 288  Paramecium tetraurelia
XP_001703331  240 -RLPTQSEIEPLEHRLSAl-SGPAMQFLRACLNPDPKQRATADELLAMPYF 288  Chlamydomonas reinhardtii
XP_001703541 1713 -IVFNIKQPLSLAARYRGkvSDLELDFLAGLLEMDPEKRLTGDQCLQHPYL 1762 Chlamydomonas reinhardtii
EEE22847      241 -AFPELPPRETLLLRYRNkfDRTAIDFLSKLLCMDPKARLTAKMALQHPYF 290  Toxoplasma gondii GT1
EEH54868      249 -KFPDMSTPDGIERRYAGkcSNKGMAFMKATLAMDPKERLTWHGMLTHPYF 298  Micromonas pusilla CCMP1545
XP_001689794  241 -ATIPPLHKDLRQRLPEV--EPRLLELVAACLRLDPAARPTAAELLQMPYF 288  Chlamydomonas reinhardtii
4505569       239 -RLPEIKEREPLERRYPKl-SEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 287  human
O76039        248 -RFPAVNHPQSLERRYLGilNSVLLDLMKNLLKLDPADRYLTEQCLNHPTF 297  human
AAG49589      238 -TFPSVDVEETLQQRFPTa-ASPWLEFLTSCLRMDPVERPSCTALMSMAYF 286  Trypanosoma brucei
XP_667043     317 sAVIPPYQIISIKERYEKkvDLIALDFLQKSLTIDPKMRPDCQELLLHPFF 367  Cryptosporidium hominis TU502
CAK68918      239 -KFPEISKPETLEQRYLCklPKRAINFVKGLLKMEPSERLTCRQALKHQYF 288  Paramecium tetraurelia
XP_001703331  240 -RLPTQSEIEPLEHRLSAl-SGPAMQFLRACLNPDPKQRATADELLAMPYF 288  Chlamydomonas reinhardtii
XP_001703541 1713 -IVFNIKQPLSLAARYRGkvSDLELDFLAGLLEMDPEKRLTGDQCLQHPYL 1762 Chlamydomonas reinhardtii
EEE22847      241 -AFPELPPRETLLLRYRNkfDRTAIDFLSKLLCMDPKARLTAKMALQHPYF 290  Toxoplasma gondii GT1
EEH54868      249 -KFPDMSTPDGIERRYAGkcSNKGMAFMKATLAMDPKERLTWHGMLTHPYF 298  Micromonas pusilla CCMP1545
XP_001689794  241 -ATIPPLHKDLRQRLPEV--EPRLLELVAACLRLDPAARPTAAELLQMPYF 288  Chlamydomonas reinhardtii

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