Conserved Protein Domain Family
UPA_2

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pfam17809: UPA_2, with user query added  
UPA domain
The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.
Statistics
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PSSM-Id: 375346
Aligned: 6 rows
Threshold Bit Score: 220.422
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

query    1309 VPYMAKFVVFAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARS     KDIEVLEGKPIYVDCYGNLAPLTKGG 1381
VDD78185  264 VPYLGQFVVYARRHHPEEAQIRCVCLTDDTEQKTLECQEGFEVVARG.[2].NLVEFLHDRPVWIETAGNLVPVAGQA 338 
EDV26047  344 VPYLANVAIFANSYQPGEASMRIACMTNDGLYDSLDFHEGMVQIASK     ENVPIIDGSRVSIQCSGNLLPIKAKS 416 
EDS45311  114 VPFMAKFVVFAKRTDPLEARLRVFCMTDDREDKTLEHQEHFTEVAKS     RDVEVLEDKPQFIELAGNLIPITKSG 186 
KFM00411 1234 VPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARS     RDIEVVEGMPLHVELSGNLVPVKKAT 1306

query    1382       QQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGL     PQ.[1].AVCNLNITLP 1438
VDD78185  339 .[10].QMRFASVRAFEENRLNMLIRIKDLNGPPAGQLAFMPQQRQPGGV     SV.[1].PLCVVDLMLP 405 
EDV26047  417       ASWQMDFKPYRENVLDGSVRVTTPSDPPKGLMSFVRDAKVDGRT     VS.[1].MLCTLGVVLP 473 
EDS45311  187       EQLSLPFKAFRENRLPFSVRVKDQHADIVGRTLFMREPKIAKGE.[1].PQ.[1].PICILNIVLP 244 
KFM00411 1307       QPRTFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDL     QH     VLCHLNISIP 1362
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