Conserved Protein Domain Family
DEXDc_SHPRH-like

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cd18008: DEXDc_SHPRH-like 
DEXH-box helicase domain of SHPRH-like proteins
The SHPRH-like subgroup belongs to the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350766
Aligned: 63 rows
Threshold Bit Score: 151.286
Created: 3-Feb-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
ATP bindingDEAD box
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Saccharomyces cerevisiae Chd1 with bound gamma-thio-ATP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1                                     #######                                #            
XP_003219235  636 LLLHQKQALAWLL.[ 6].PCGGILADDMGLGKTLTMIALILAQK.[ 30].TLIVCPASLIHHWKNEIER.[ 7].KVC 739  green anole
EEA28537      252 LFHHQVLGAGFMR.[ 8].PKGGMLCDVMGLGKTIQTLANIVDGA.[ 10].TLIVAPRGLITQWKMQIEK.[ 9].ILC 339  Penicillium marnef...
CBX93817      437 LKHYQILGTAFMR.[ 8].PRGGLLADQMGLGKTLMMLANIVNGQ.[ 10].TLLVASPALLSQWKSEFEQ.[ 5].LTI 520  blackleg of rapese...
Q9M1I1        330 LFPHQQAAVGWML.[44].FRGGMFCDEPGLGKTITALSLILKTQ.[343].TLIVVPTNLVNHWLTQIQK.[ 5].QLR 782  thale cress
ABO96387      101 LHPHQRAALGWMR.[45].SQGGMLCDEPGLGKTVTALALVLARR.[275].TLIIIPSVLIEHWLQQISF.[11].RVA 492  Ostreococcus lucim...
CCA36786      254 LYKYQRRSIVRML.[44].PRSGILAENMGLGKTCLCLVLIYITK.[ 92].TLVIVPDNLYRQWITEIDK.[ 4].NAF 454  Pichia pastoris GS115
EEQ37877       32 LYPYQINSLCKMY.[43].PRGGILAENMGLGKTLICLSLVCLTK.[ 95].TLLIVPENLFHQWNSELKK.[ 6].LHK 236  Clavispora lusitan...
EFZ00316      208 LYAYQRRSIAVMV.[43].VCGGILAEEMGAGKTIICLALILATR.[ 96].TIVVVPTNLLSQWKHEIAK.[ 5].TVR 412  Metarhizium anisop...
EGE79308      261 LYAYQRRSAAYMI.[43].ACGGILAETMGYGKTLICLAVILATR.[ 95].TLIVVPPNLVDHWLSEIDK.[ 5].KVL 464  Ajellomyces dermat...
CAZ84401      160 LYGYQKKTVAMMI.[43].VRGGILAEDTGTGKTFICLALILATK.[ 87].TIVVCPPNLVDQWKREINI.[ 8].TLA 358  Tuber melanosporum...

Feature 1                                            ##                                        
XP_003219235  740 LYHGP.[12].DVVVTTYSILAK.[32].WARIILDEAHNIKN.[2].VQASMAACKLR.[1].TARWAVTGTPIQN 841  green anole
EEA28537      340 HYAGS.[13].KIILTSYDEIRI.[36].FRRIILDEGQQIRN.[2].SQTSIAVRALH.[1].HYKWILTGTPLLN 446  Penicillium marneffei...
CBX93817      521 LRYGA.[16].DIILTSYTEVMR.[36].FLRVVLDEAQAIKN.[2].GRTSIACRALM.[1].THKWALSGTPILN 630  blackleg of rapeseed ...
Q9M1I1        783 ILVWA.[14].DVVITTFSRLSA.[14].WLRVMLDEGHTLGS.[4].TNKFQMAVSLT.[1].CNRWLLTGTPTPN 870  thale cress
ABO96387      493 VLDKP.[36].DIVIMPINRLST.[13].WQRVILDEGHQLGA.[4].TAKLSVACALK.[1].HARWLMTGTPTPT 601  Ostreococcus lucimari...
CCA36786      455 ELLGF.[17].DIILIASSIFAR.[13].WKRLIVDEGHSMSS.[2].SRPSELARSLY.[1].ERKWVISGTPTRG 542  Pichia pastoris GS115
EEQ37877      237 LFVSD.[27].DLVVITSAAFAK.[12].WKRLIIDEGHSMGS.[2].SNISVLCSALQ.[1].ERRWVVTGTPTPG 333  Clavispora lusitaniae...
EFZ00316      413 VLSKD.[12].DIILFSQSRFER.[17].FKRCIVDEGHKLGN.[6].SNLLRGLDRMN.[1].SSRWIVTGTPSHG 503  Metarhizium anisoplia...
EGE79308      465 VLRDS.[13].DILLFSKSRFEK.[25].WLRIIVDEGHNFAA.[4].TTAVHALSQLH.[1].ERRWVVSGTPSRG 562  Ajellomyces dermatiti...
CAZ84401      359 LVKSS.[12].DLVIIARPRFDM.[23].WKRLIVDEGHSMAS.[5].NRGVCVAQRLP.[1].ERRWIVSATPVTG 454  Tuber melanosporum Mel28

Feature 1                                        
XP_003219235  842 .[1].LLDMYSLLRFLRC.[ 29].SLLLRR 890  green anole
EEA28537      447 .[1].SAEFWAYFKFLGV.[ 29].KVVYRR 495  Penicillium marneffei ATCC 18224
CBX93817      631 .[1].LTELYPYFKFLGV.[ 30].QFMMRR 680  blackleg of rapeseed fungus
Q9M1I1        871 .[5].LSHIQPLLKFLHE.[ 71].VETVRR 965  thale cress
ABO96387      602 .[1].LKGAGTAHLQPLL.[ 38].GDVLRR 659  Ostreococcus lucimarinus CCE9901
CCA36786      543 .[1].TRLHVNKEEVQKP.[118].GAELRR 680  Pichia pastoris GS115
EEQ37877      334 .[1].TNLHMDEDESGHN.[132].RSQLRR 485  Clavispora lusitaniae ATCC 42720
EFZ00316      504 .[1].FGVDNRTPAGSSP.[ 77].SLIIRH 600  Metarhizium anisopliae ARSEF 23
EGE79308      563 .[1].YGIEVALASQESV.[ 30].IDKLRS 612  Ajellomyces dermatitidis ATCC 18188
CAZ84401      455 .[1].LGMSSGMNIGETE.[ 33].DFLRVR 507  Tuber melanosporum Mel28

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