2EGA


Conserved Protein Domain Family
SH3_Tks_1

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cd12015: SH3_Tks_1 
Click on image for an interactive view with Cn3D
First Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins
Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the first SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212948
Aligned: 9 rows
Threshold Bit Score: 97.4902
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of p47phox tandem SH3 domains to p22phox-derived peptides
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1              # #         ##                ###               # # ##   
2EGA_A         10 QYVVVSNYKKQE.[1].SELSLQAGEVVDVIEKNESGWWFVSTSE     EQGWVPATYLEA 62   human
A1X283        156 QYVVVANYQKQE.[1].SEISLSVGQVVDIIEKNESGWWFVSTAE     EQGWVPATCLEG 208  human
XP_002125414  158 SYVVVQDYIKTQ.[1].KELNARVGEVVEVMDKHENGWWFVSTED.[1].EQGWVPGVYLGK 211  Ciona intestinalis
XP_002603793  115 QYIVIADYEKSQ.[1].TEMSVKAGTTVDVIEKNENGWWFVTVED     EQGWVPATFLDR 167  Florida lancelet
XP_783086     157 QYIVVADYKKQQ.[1].NEVELTAGDLVEVFEKNDNGWWFVTVHD     QHGWAPGTFLQN 209  purple urchin
XP_001624740  153 QYVAIADYQKQN.[1].NEITMVAGDIVEVIDKNENGWWFVNLDE     EQGWVPAAYLES 205  starlet sea anemone
XP_001631362    7 QYVVITDYKKTQ.[1].KDLNLRAGNVVDVIQKNEHGWWFVDLDG     ELGWVPASYLEP 59   starlet sea anemone
XP_003386839  151 QYTAIADYKKQK.[1].TECSLAAGQVVEVIDKNENGWWFVHMDD.[1].NEGWVPATYLEP 204  Amphimedon queenslandica
XP_002158214  158 QYTVVEAFKKSE.[1].NQIGLAIGDVVDVIEKHENGWWFVSLED     EQGWAPGSYLEP 210  green hydra

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