1J6O


Conserved Protein Domain Family
TatD_DNAse

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cd01310: TatD_DNAse 
Click on image for an interactive view with Cn3D
TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Statistics
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PSSM-Id: 238635
Aligned: 84 rows
Threshold Bit Score: 147.72
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:active site is based on homology to other members of the amidohydrolase family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1         # #                                                                         
1J6O_A     13 XVDTHAHLH.[10].VISSFEEN.[2].EFVVNVGV.[ 5].KKSLDL.[ 7].FCSVGVHP.[14].EKFAKDE.[2]. 98  Thermotoga maritima
NP_902506  59 LIDPHAHMI.[ 5].DYEAMAAS.[2].VAVIEPAF.[13].DYFSTI.[15].YCAIGLNP.[16].PRYLGKE.[2]. 157 Chromobacterium violace...
NP_484464  11 FIDPHIHMS.[ 5].DYEKMRQS.[2].VAVIEPAF.[13].DYFSSL.[15].YCTIGLNS.[16].PLYACKE.[2]. 109 Nostoc sp. PCC 7120
NP_842779   3 WIDSHIHVD.[ 9].LLKDVENS.[3].QGLIAVSM.[ 5].KEILSL.[ 7].HPAVGFHP.[14].LIEDHVE.[2]. 88  Bacillus anthracis str....
NP_559693   1 MFDNHVHCH.[ 5].EITQYQKD.[2].LVCVSDDL.[ 3].KKTVEL.[ 3].VKCIGIHP.[14].LRLIEKW.[2]. 75  Pyrobaculum aerophilum ...
NP_147217   9 VYDMHVHLH.[ 8].EILDADKS.[2].VVAVSDDL.[ 3].WRTLDL.[ 8].VPCLGFHP.[14].LRLAYRY.[2]. 91  Aeropyrum pernix
NP_341622   2 LVDSHAHID.[ 4].DMDREFVI.[2].CQILIVNA.[ 7].LHTLEL.[ 7].IPAIGFHP.[11].KCLELTR.[2]. 80  Sulfolobus solfataricus
P45305      2 LFDSHLHLD.[ 6].IQQTLAHS.[2].IGMLAVST.[ 5].KKLLNL.[ 8].YIAAGFHP.[14].QWIDEHH.[3]. 85  Haemophilus influenzae
B97072      2 FIDAHNHLD.[12].DIIKNDNI.[1].TLGCSMDT.[ 3].KFTKSL.[ 7].IPCFGIHP.[10].ECFDEYI.[3]. 83  Clostridium acetobutylicum
NP_756373   2 SIDMHCHLD.[ 6].LVAEESKR.[2].TYILSVTT.[ 5].HGTSLL.[ 7].RTALGLHP.[10].DLFDSLL.[3]. 80  Escherichia coli CFT073

Feature 1                                            #                        #             
1J6O_A     99 VAIGETGLDFF.[ 8].QKRVFVEQIELAG.[4].PLVVHIR.[3].SEAYEILR.[7].RGVIHAFS.[4].WAKKF 176 Thermotoga maritima
NP_902506 158 VALGEIGYDEQ.[ 3].EDRAFRAQIELAQ.[4].PIMIHTP.[8].RRTMDTLE.[7].RCVIDHNN.[2].TAQEV 233 Chromobacterium violaceum...
NP_484464 110 VAIGEIGYDDM.[ 3].EDKYFRLQLELAR.[4].LVMIHTP.[8].SRSMDVCI.[7].QVIVDHNN.[2].TVKEV 185 Nostoc sp. PCC 7120
NP_842779  89 VAIGEVGLPYY.[12].YISVLQRFVELAS.[4].PIVLHAV.[4].DVVCDLLE.[5].RAHFHWFK.[4].TMERM 169 Bacillus anthracis str. Ames
NP_559693  76 PCVGEVGLDKK.[ 8].QVEYFRAFLKLAR.[4].VVNVHAP.[3].QDALEMLR.[5].RAIIHWFT.[4].LLETI 151 Pyrobaculum aerophilum st...
NP_147217  92 PCLGEVGLDRR.[ 9].QNEVFDAFVQLAE.[4].MLNIHAP.[3].KHVAHRIG.[5].RFMYHWYT.[4].LPRAL 168 Aeropyrum pernix
NP_341622  81 KIISEVGLDYF.[10].QIEVLEKFLQIAE.[4].PVIIHIR.[3].KDFLEIIN.[4].RFVIHSFE.[4].IANKV 157 Sulfolobus solfataricus
P45305     86 SAIGEVGLPHY.[12].YIELLERFILIAK.[4].PLNLHIV.[4].EIALELLQ.[5].RAHFHWFK.[4].SFQKF 166 Haemophilus influenzae
B97072     84 KIIGEIGLDYV.[10].MKRVFTYFLEEAK.[4].ITNIHTK.[3].SEIYNYIK.[5].TPIIHWYS.[4].TLKKL 161 Clostridium acetobutylicum
NP_756373  81 KYVGEIGLDGG.[ 9].QLKVFRHILNSVN.[5].IMTIHSR.[3].SAVLDEIE.[4].VAILHWFT.[4].QLERA 157 Escherichia coli CFT073

Feature 1                                            #                                        
1J6O_A    177 .[3].GFLLGIGGPVTY.[7].EVVKRVG.[3].IVLETDCPFLPP.[7].NEPKYLKYVVETISQV.[7].VDEATTEN 258 Thermotoga maritima
NP_902506 234 .[3].GYWCAFTIYPST.[8].AIVERYG.[1].ERIIVDSACDWG.[1].SDPLAVAKSARIMAAH.[6].IRQVVYHN 307 Chromobacterium violace...
NP_484464 186 .[3].GFWAAFTIYPNT.[8].EIVRQYG.[1].NRIIVDSSADWG.[1].SDPLAVPKTALLMLER.[6].VEKVCYEN 259 Nostoc sp. PCC 7120
NP_842779 170 .[3].GYYISITPDVLH.[5].KIVSYYP.[3].MMVETDGPWGFQ.[4].THPGMIREVLKEISVI.[7].VAETIYEN 246 Bacillus anthracis str....
NP_559693 152 .[3].GYYITINPAVAI.[5].EVAKTAD.[3].VLLESDGPYEYR.[3].LAPPVIKNTVEKLSEL.[7].VVEVVETN 227 Pyrobaculum aerophilum ...
NP_147217 169 .[3].RVWFSINSAIRV.[5].RVAREIP.[3].LVVESDGPYNYR.[3].LSPLMVRETVKLVAEA.[7].LMEAISLN 244 Aeropyrum pernix
NP_341622 158 .[3].GGLISIPPIIVR.[5].KVAKEIP.[3].ILTETDSPFMGP.[5].NKPCNVKIVVKQISLL.[7].IEEKIYKN 235 Sulfolobus solfataricus
P45305    167 .[3].PYFASLTPDILW.[5].YVAQHLS.[3].LMIETDSPWQHE.[5].GISEQLLAVLQKLAEL.[7].VQKQILLN 244 Haemophilus influenzae
B97072    162 .[3].GCYFTISVDIGY.[5].EIVQLLP.[3].ILTETDGPTSLE.[6].GYPNVIKNVVKEISKI.[7].VKGVIENN 240 Clostridium acetobutylicum
NP_756373 158 .[3].GCWFSVGPAMLD.[5].ALVLKIP.[3].ILTETDGPFAKF.[4].LMPWDSGIAEKQLAAL.[7].VNAQLVDN 234 Escherichia coli CFT073

Feature 1           
1J6O_A    259 ARRIFL 264 Thermotoga maritima
NP_902506 308 ALAVYG 313 Chromobacterium violaceum ATCC 12472
NP_484464 260 ALSAYG 265 Nostoc sp. PCC 7120
NP_842779 247 TIQFYL 252 Bacillus anthracis str. Ames
NP_559693 228 AKRLWR 233 Pyrobaculum aerophilum str. IM2
NP_147217 245 SERLLG 250 Aeropyrum pernix
NP_341622 236 FVSLFT 241 Sulfolobus solfataricus
P45305    245 TQQFYR 250 Haemophilus influenzae
B97072    241 FKTLIR 246 Clostridium acetobutylicum
NP_756373 235 FKVLCT 240 Escherichia coli CFT073

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