3J20


Conserved Protein Domain Family
uS17_arch

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TIGR03630: uS17_arch 
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ribosomal protein uS17, archaeal form
This model describes exclusively the archaeal ribosomal protein S17P. It excludes the homologous ribosomal protein S17 from bacteria, and is not intended for use on eukaryotic sequences, where some instances of ribosomal proteins S11 score above the trusted cutoff. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 274687
Aligned: 22 rows
Threshold Bit Score: 143.982
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

3J20_R   5 IGLRVQPPAEKCDDPKCPWHGNLKIHGRVFEGIVVSDK.[1].RKTVTVERQYYFYLNKYERYELRRSKIHAHNPPCI 78  Pyrococcus furiosus DSM 3638
Q8TW21  11 IGLGVKPPRRECDDPNCPFHGNLRVRGMILEGVVVSDR.[1].DKTVIVEREYYRYDRKYERWERRRSRIPAHNPPCI 84  Methanopyrus kandleri AV19
O24786   3 IGLNVTEPEGTCSDEDCPFHGNLSVRGQVLEGEVASTD.[1].EKTVVVEREYDVFVPKYDRYMKRRSRVPAHAPECF 76  Halobacterium sp. NRC-1
P54036   6 IGIQVKAPEVECDDKNCPFHGNLPVRGQSFVGVVVSDK.[1].HKTVIIKREVVKYIKKYERYERRTTKLAAHNPPCI 79  Methanocaldococcus jannaschi...
Q8PV41   5 IGLNIPAPSEECDDAYCPFHGTLPVRGQILVGTVVSSK.[1].DNTVVIERQYMKMVSKYQRYEKRRSKIHAHNPACI 78  Methanosarcina mazei Go1
O26120   2 VGIDVPEPKSKCSDPNCPFHGDLPLRGQILEGTVVSDK.[1].ERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDCI 75  Methanothermobacter thermaut...
O28363   4 IGIDVKPPERECEDENCPFHGTLSVRGQLLRGKVVKVY     GKTAVIERELIRYVPKFERYMKKRSKLHAHNPRCI 76  Archaeoglobus fulgidus DSM 4304
Q2FT32   5 IGLNVPVPEKDCSDVNCPFHGTLPVRGQVITGKVVSDK.[1].TGSVVVQRDYLHFVRKYQRYEKRSSKIHAHNPPCL 78  Methanospirillum hungatei JF-1
Q6L1B8   4 IGIDVKKPERTCNDPKCPFHGNLRIHGQIIVGTVVSTK.[1].NGSIVLKRESRRLIKKYERYETKISKFHAHLPGCI 77  Picrophilus torridus DSM 9790
Q74NJ4   3 LAELIELPKEQCNDKKCPHHGHLKVRGFFFKGKVIKKS.[1].NKTVKIEIIRYYWLPKYERYELRRTRITAYLPECL 76  Nanoarchaeum equitans Kin4-M

3J20_R  79      NAKVGDKVLIAETRPLSKTKHFVVVAVL 106 Pyrococcus furiosus DSM 3638
Q8TW21  85      DAQEGDKVRIAECRPLSKTKSFVVIEVL 112 Methanopyrus kandleri AV19
O24786  77      DISVGDTVSIAETRPLSKTKSHVVVEIT 104 Halobacterium sp. NRC-1
P54036  80      HARVGDIVRVMECRPISKTKAFVVVEKL 107 Methanocaldococcus jannaschii DSM 2661
Q8PV41  79      SAKVGDIVTIVECRPISKTKSFVVVKAE 106 Methanosarcina mazei Go1
O26120  76      DVRVGDTVKIAECRPLSKTKNFVVVEVK 103 Methanothermobacter thermautotrophicus str. Delta H
O28363  77      RARPGDIVTIGECRPISKTKSFVILEVV 104 Archaeoglobus fulgidus DSM 4304
Q2FT32  79      HARVGDMVSIAECRPLSKTKTYVVVEVN 106 Methanospirillum hungatei JF-1
Q6L1B8  78      DVRPGDRVKIAECRKLAKTISFVVVEKV 105 Picrophilus torridus DSM 9790
Q74NJ4  77 .[1].DIKEGDYVLIGETRPLSKTKHFVVLGKL 105 Nanoarchaeum equitans Kin4-M
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