Conserved Protein Domain Family
PHA03247

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PHA03247: PHA03247, with user query added  
large tegument protein UL36; Provisional
Statistics
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PSSM-Id: 223021
Aligned: 7 rows
Threshold Bit Score: 4070.65
Created: 9-Dec-2010
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

query     1691 .[10].TGVPTPTSVLSCPSYEEV.[2].TPRT     PSCSADDYADLVF     DCA     DSQHSTPVPTAPTSAC 1756
30984464  2591 .[10].PSHQTPAILPDEPVGETV     HPRM.[7].EELASDDAGDPPP     PLP.[1].AARPAAPDRSVPPPRP 2662
9629306   2524 .[14].PGVLAPTLLTDATTGEPV     PPRM.[7].EELASDDAGGPTP.[1].PAP.[1].LLPPPATDQSVPTSQY 2600
56694759  2509 .[10].PSRPAPAILPDEPVGEAV     HPRM.[7].EELASDDAGDPPP     PLP.[1].AAPPAAPDRSVPPPRP 2580
83722605  2553 .[10].PSRPTPAILPDEPVGEAV     HPRM.[7].EELASDDAGDPPP     PLP.[1].AAPPAAPDRSVPPPRP 2624
155041490 2525 .[ 1].PGSLAPTLFTDATPGEPV     PPRM.[7].EELASDDSGGPAP     LLA.[1].DPLSPTADQSVPTSQC 2587

query     1757 SP.[4].RFSVASSGLSENASQAPARPLST.[12].TP.[5].VGDK.[5].SVPA.[1].SSYDSPMPP.[2].EDRAP 1834
30984464  2663 AP     RPSEPAVQSRARRPDAPPQSARP.[ 1].TP     RDDP     GPPA.[3].TLPPSPPPP     APHPP 2715
9629306   2601 AP     RPIGPAATARETRPSVPPQQNTG.[ 1].VP     VAPR     DDPR     PSPPTPSPP     ADAAL 2650
56694759  2581 AP     RPSEPAVRSRARRPDAPPQPASP.[ 1].TP     GDDS     GSPP.[1].PAAPNALPP     DTHPP 2631
83722605  2625 AP     RPSEPAVGSRAHRPDAPPQPARP.[ 1].AP     GDDS     GSSP.[1].QAAPASLPP     DTPRP 2675
155041490 2588 AP     RPPGPAVTAREARPGVPAESTRP      AP     VGPR     DDFR.[3].SPQSSPAPP     DATAP 2639

query     1835 LPPVPAEKFACL.[19].HCPPAAVVTVTP.[10].AKPS     PSPRA.[3].VPSLEGALP.[1].DLDTSEDQQ 1918
30984464  2716 DPPPPDPSPRPN.[33].PAPGRVSLPRRA.[ 9].SPLQ.[1].PRRRA     ARPAVGSLT     NLADPHPPG 2809
9629306   2651 PPPAFSGSAAAF.[ 1].AAVPRVRRSRRT.[10].APPE.[1].WRPPA     LPAPVAPVA     ASARPPDQP 2713
56694759  2632 DPPPPAPRPHGN.[20].PAPRRVSPRRRV      SPPR.[1].PRRRA     ARPTVGSLA     SLADPPPPE 2703
83722605  2676 DPPPPGPRPRAT.[30].PAPGRVSLPRRA.[10].SPPR.[1].PTRRA     ARPAVGSLT     SLADPPPPE 2767
155041490 2640 RPPASSRASAAS      SSGSRARRHRRA.[10].ATTQ.[1].WRPPA     LPDTVAPVT     DFARPPAPP 2701

query     1919 .[ 2].AAIIP.[27].PSEQALASSLIGGTSEN.[2].SWPVGSDL.[1].LKSPQRFPES     PKRFC.[44].GV 2041
30984464  2810 .[21].PAPPP.[34].AAPAAPAAPAAPAAPAA.[2].APAAPAAP.[1].APAAPAAPAA.[1].AAPAA.[48].PA 2963
9629306   2714 .[ 2].PESAP.[27].IPPPPAEGAVVPGGDRR.[2].RRQTTAGP     SPTPPRGPAA.[1].PPRRL.[36].PS 2828
56694759  2704 .[ 2].PEPRP      APRASPNAPATDVSVTP.[2].SPPATSGA.[1].RSAPPAAPPT.[1].PPPAA.[ 4].PA 2760
83722605  2768       PEPRP.[27].ATPATPATPATPATPAT.[2].TPATPATP.[1].SAAAAADRAS.[1].PPATT.[40].PA 2885
155041490 2702 .[ 2].PEPAP.[27].VPPPVATGTVLPGGENR     RPPLTSGP     APTPPRVPVG.[1].PQRRL.[40].PA 2818

query     2042 DAVPAAISTSEAAP.[ 2].PPSGLESFFSNCKSL.[2].APL     DVAPEPACVAAVA.[1].VEA.[21].EPVPW 2120
30984464  2964 SPVPTPTSSLPTPP.[ 2].PPAFFQPSLATGGSV     APG.[1].DFRRRAPSRPTAA.[1].PAA      PSRPP 3020
9629306   2829 PGLAPPTSAVQTSP.[ 3].APGPVAPSEPLCGWV     VPG.[1].PVARRPPPQSPAT.[1].PAA      RTRIR 2886
56694759  2761 ATLPPPTTPTPAAP      PKPPLESTLSMGGAV     APG.[1].DFRRRGPSRAAPA     PAT      PRHPP 2814
83722605  2886 TLEPPTTTAAPAAS.[11].PSEPSPEPTPPGGSV     APG.[1].DLRRRGPAGSAPP.[1].VAA      PPHPP 2951
155041490 2819 GPSPPPPAVQPVAP.[ 2].TSGPPPTYLTLEGGV     APG.[1].PVSRRPTTRQPVA.[1].PTT      SARPR 2875

query     2121      ADAFAGPEDDLD.[2].PFSLPELPLQTKDAADGEAEP.[14].AP.[14].EPPALPPDQAST.[30].EER 2230
30984464  3021      ARRLARPAVSRS.[2].SFALPPDELARPRTPEAPAPP.[14].PE      PPQGRPPSPAAP.[28].VPR 3114
9629306   2887      ARSVPQPPLPQP     PLPQPPLPQPPLPQPPLPQPP.[14].PL      PQPPLPQPPLPP      VTR 2950
56694759  2815      VRRLARPAVSRS.[2].SFALPPDSPERPPPPDSPERP.[14].AP      RTPGRSDAPLAP.[28].VPR 2908
83722605  2952      VRRMARPAVSRS.[2].SFALPPDGPERPRTPAAATEA      AP      ETPARPDAPLAP.[28].VPR 3031
155041490 2876 .[4].VSRLSAPQPQPQ.[2].PQPQPQPQPQPQPQPQPQPQP.[14].QP      QPQPQPQPQPQP.[23].AVR 2968

query     2231 .[1].RGDPDSSVEPAPVPPEQRPLGS.[1].DQGAEAE.[3].AASLCAPDGPAPNTVAQAQAAD.[3].PEDD.[1]. 2294
30984464  3115 .[1].QIPPPAPPREIPAPSPPPPRSH     APRVSSW     ASSLALHEEPDAGPVSLKQTLW     PPDE.[1]. 3171
9629306   2951 .[1].LTPQSRDSVPTPESPTHTNTHL.[1].VSAVTSW     ASSLALHVDSAPPPASLLQTLH     ISSD.[1]. 3008
56694759  2909      RVSSPAPSREAPAPSTSSLHDH     DPRLSSW     ASSLALDEETDPRPVSLKQTLW     PPDD.[1]. 2964
83722605  3032      RVSSPAPSRETPASSTPSLRRH.[1].TSRVSSW     ASSLALHEETDHGPVSLKQTLW     SPDD.[1]. 3088
155041490 2969 .[1].RAPQNRPSVPASASSTNPRTGS.[1].LSGVSSW     ASSLALHIDATPPPVSLLQTLY     VSDD      3025

query     2295 EASR.[7].PP.[3].QPEAAEPKP.[2].EA.[3].P.[5].P.[1].RMTRNRAQMLANQSKQGPPP 2354
30984464  3172 DDAS.[7].DP.[3].DLGSLDPET     DP.[3].P.[4].P.[1].PRAPEAGDRASPSSYFGPPP 3228
9629306   3009 EHSD.[7].DS.[1].DTEALDPLP     PE.[3].P.[4].P     PGPLAADHLQSPHSQFGPLP 3062
56694759  2965 EGSD     DT.[3].DESSVDANP     ND.[3].P     N.[1].PPTPEAGAREDPGSHFGPPP 3010
83722605  3089 EESD.[6].DP.[3].DLEAPDPDD     PD     P.[4].P.[1].PNTPEAGARASPSSHFGPPP 3141
155041490 3026 EDSD.[7].DS     EAEALDPLP     GE.[3].P.[4].P.[1].SALSADDSQEVTRLQFGPPP 3079
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