Conserved Protein Domain Family
PHA03247

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PHA03247: PHA03247, with user query added  
large tegument protein UL36; Provisional
Statistics
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PSSM-Id: 223021
Aligned: 7 rows
Threshold Bit Score: 4070.65
Created: 9-Dec-2010
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

query      401 GGPSR     MSPKAQRPLRGAKTL     SSPSNRPSGEA     SVPPTSAA.[1].P.[1].LPVGRMYPPR.[1]. 453 
30984464  2638 GDPPP     PLPPAARPAAPDRSV.[2].PRPAPRPSEPA.[8].DAPPQSAR     P.[1].TPRDDPGPPA.[3]. 2701
9629306   2575 GGPTP.[1].PAPALLPPPATDQSV.[2].SQYAPRPIGPA.[8].SVPPQQNT     G.[1].VPVAPRDDPR      2636
56694759  2556 GDPPP     PLPPAAPPAAPDRSV.[2].PRPAPRPSEPA.[8].DAPPQPAS     P.[1].TPGDDSGSPP.[1]. 2617
83722605  2600 GDPPP     PLPPAAPPAAPDRSV.[2].PRPAPRPSEPA.[8].DAPPQPAR     P.[1].APGDDSGSSP.[1]. 2661
155041490 2563 GGPAP     LLAPDPLSPTADQSV.[2].SQCAPRPPGPA.[8].GVPAESTR     P     APVGPRDDFR.[3]. 2625

query      454 PKSAAPAPVSASCPEPPI     GSAVAS.[19].PASPKLSL.[12].PSR.[3].A.[10].PGLQNEQKR.[13].K 556 
30984464  2702 TLPPSPPPPAPHPPDPPP.[2].PSPRPN.[33].PAPGRVSL      PRR     A.[ 9].SPLQRPRRR      A 2791
9629306   2637 PSPPTPSPPADAALPPPA.[2].GSAAAF.[ 1].AAVPRVRR      SRR     T.[10].APPEGWRPP      A 2695
56694759  2618 PAAPNALPPDTHPPDPPP.[2].PRPHGN.[20].PAPRRVSP      RRR     V      SPPRRPRRR      A 2685
83722605  2662 QAAPASLPPDTPRPDPPP.[2].PRPRAT.[30].PAPGRVSL      PRR     A.[10].SPPRRPTRR      A 2749
155041490 2626 SPQSSPAPPDATAPRPPA.[2].RASAAS      SSGSRARR      HRR     A.[10].ATTQGWRPP      A 2683

query      557 LQPSSSPETGL     DPFP.[22].PM.[ 2].PVSS.[12].P.[38].VTEQVKKSTLNPNAKEF.[2].TKPL 675 
30984464  2792 ARPAVGSLTNL.[1].DPHP      PG.[21].PAPP      P.[34].AAPAAPAAPAAPAAPAA.[2].APAA 2892
9629306   2696 LPAPVAPVAAS.[1].RPPD      QP.[ 2].PESA      P.[27].IPPPPAEGAVVPGGDRR.[2].RRQT 2770
56694759  2686 ARPTVGSLASL.[1].DPPP      PE.[ 2].PEPR      P      APRASPNAPATDVSVTP.[2].SPPA 2733
83722605  2750 ARPAVGSLTSL.[1].DPPP      PE      PEPR      P.[27].ATPATPATPATPATPAT.[2].TPAT 2822
155041490 2684 LPDTVAPVTDF.[1].RPPA      PP.[ 2].PEPA      P.[27].VPPPVATGTVLPGGENR     RPPL 2756

query      676 .[6].TSTP.[1].SPGP.[5].PSIPV.[1].TAGQSGL.[40].GAKGSLPPQRSDQHQP.[ 2].APP.[17].PYS 789 
30984464  2893      PAAP.[1].APAA     PAAPA     APAAPAA.[48].PASPVPTPTSSLPTPP.[ 2].PPA      FFQ 2985
9629306   2771      TAGP     SPTP     PRGPA     AGPPRRL.[36].PSPGLAPPTSAVQTSP.[ 3].APG      PVA 2851
56694759  2734      TSGA.[1].RSAP     PAAPP     TTPPPAA.[ 4].PAATLPPPTTPTPAAP      PKP      PLE 2780
83722605  2823      PATP.[1].SAAA     AADRA     SAPPATT.[40].PATLEPPTTTAAPAAS.[11].PSE      PSP 2916
155041490 2757      TSGP     APTP     PRVPV     GGPQRRL.[40].PAGPSPPPPAVQPVAP.[ 2].TSG      PPP 2840

query      790 SYIPYNPQQFPGQPAMMQPM.[3].PSQPVF.[1].PMLQSNP     RMLTSGSHPQA.[2].SSSTPQYPAAEQPTPQ 855 
30984464  2986 PSLATGGSVAPGGDFRRRAP     SRPTAA.[1].PAAPSRP.[2].RRLARPAVSRS.[2].SFALPPDELARPRTPE 3050
9629306   2852 PSEPLCGWVVPGGPVARRPP     PQSPAT.[1].PAARTRI.[2].RSVPQPPLPQP     PLPQPPLPQPPLPQPP 2914
56694759  2781 STLSMGGAVAPGGDFRRRGP     SRAAPA     PATPRHP.[2].RRLARPAVSRS.[2].SFALPPDSPERPPPPD 2844
83722605  2917 EPTPPGGSVAPGGDLRRRGP     AGSAPP.[1].VAAPPHP.[2].RRMARPAVSRS.[2].SFALPPDGPERPRTPA 2981
155041490 2841 TYLTLEGGVAPGGPVSRRPT     TRQPVA.[1].PTTSARP.[6].SRLSAPQPQPQ.[2].PQPQPQPQPQPQPQPQ 2909

query      856 ALYAT.[19].ATTP.[3].QPQSQHAAPS.[28].GTP.[1].SLP     PGPSAQSPQSSFPQP 946 
30984464  3051 APAPP.[14].PEPP     QGRPPSPAAP.[28].VPR.[1].QIP.[1].PAPPREIPAPSPPPP 3134
9629306   2915 LPQPP.[14].PLPQ     PPLPQPPLPP      VTR.[1].LTP.[1].SRDSVPTPESPTHTN 2970
56694759  2845 SPERP.[14].APRT     PGRSDAPLAP.[28].VPR     RVS.[1].PAPSREAPAPSTSSL 2927
83722605  2982 AATEA      APET     PARPDAPLAP.[28].VPR     RVS.[1].PAPSRETPASSTPSL 3050
155041490 2910 PQPQP.[14].QPQP     QPQPQPQPQP.[23].AVR.[1].RAP.[1].NRPSVPASASSTNPR 2988
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