Conserved Protein Domain Family
COX1

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MTH00153: COX1, with user query added  
cytochrome c oxidase subunit I; Provisional
Statistics
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PSSM-Id: 177210
Aligned: 255 rows
Threshold Bit Score: 769.805
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

query       1 GLVGTALSIIIRIELAQPGPFLGDDHIYNVIVTAHALIMIFFMVMPIMIGGFGNWLLPLMLGAPDMAFPRLNNMSFWLLP 80 
11863138   25 AMIGTGLSLLIRLELSQPGSLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 104
21327729   24 GFVGAAMSVLIRLELGQCGSFLGNDQLYNVLVTAHAFVMIFFMVMPVLIGGFGNWLVPLMLGAPDMAFPRLNNLSFWFLI 103
208433775  24 SMIGTSLSMLIRTELGTPGSLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWLLP 103
222839848  25 GMVGTALSLIIRAELGQPGSLIGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 104
258649505  25 GMVGTSLSLIIRAELGQPGTLIGNDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 104
258649548  28 GMVGTSLSMLIRAELGNPGSLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 107
120944079  25 GMIGTSLSILIRAELGHPGSLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 104
290918256  25 GMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLP 104

query      81 PALLLLLASSGVEGGAGTGWTIYPPLAS.[1].IAHSGGSVDLAIFSLHLAGISSILGAINFMTTTINMRAPGVNFDRLP 156
11863138  105 PSLTLLLCSAAVESGAGTGWTVYPPLSS.[1].ISHSGASVDMTIFSLHLAGASSILGAINFISTIINMRTSGMSFERVP 180
21327729  104 PSLLLLLLSGAVEAGAGTGWTVYPPLSA     VGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVLGMYLDLVP 178
208433775 104 PSLTLLLMSSIVESGAGTGWTVYPPLSS.[1].IAHGGSSVDLAIFSLHLAGISSILGAVNFISTVINMRPIGMNLDRMP 179
222839848 105 PSLTLLLSSGMVESGVGTGWTVYPPLSA.[1].IAHAGASVDLGIFSLHLAGVSSILGAVNFMTTVINMRSTGMTMDRMP 180
258649505 105 PSLTLLLMSGMVESGVGTGWTVYPPLAA.[1].IAHAGASVDLGIFSLHLAGVSSILGAVNFMTTVINMRSFGMSMDQMP 180
258649548 108 PSLTLLLMSSLVENGAGTGWTVYPPLSS.[1].IAHGGASVDLAIFSLHLAGISSILGAVNFITTIINMRSIGITMDRMP 183
120944079 105 PSLTLLLASSMVENGAGTGWTVYPPLSA.[1].IAHGGGSVDLAIFSLHLAGISSILGAVNFITTVINMRSTGITFDRMP 180
290918256 105 PALTLLLVSSMVENGAGTGWTVYPPLSS.[1].IAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGITFDRMP 180

query     157 LFVWSVFITVILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 200
11863138  181 LFVWSVKITVILLLLSLPVLAGAITMLLTDRNLNTSFFDPTGGG 224
21327729  179 LFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGG 222
208433775 180 LFVWSVVITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 223
222839848 181 LFVWAVFITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 224
258649505 181 LFVWSVFITTILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 224
258649548 184 LFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 227
120944079 181 LFVWAVVITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 224
290918256 181 LFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 224
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