2DOQ


Conserved Protein Domain Family
Sfi1p_helix

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cd23506: Sfi1p_helix 
Click on image for an interactive view with Cn3D
Helix located at the middle N-terminal region of Sfi1p
Sfi1p is a single continuous alpha helix wrapped with centrins, which are calmodulin-like proteins present in centrosomes and spindle pole bodies (SPBs). Sfi1p is localized to the half-bridge of the yeast SPBs, and like Cdc31p (yeast centrin), it is required for the early steps of SPB duplication. Sfi1p contains a central domain composed of multiple conserved repeats which all can bind to Cdc31p. The Sfi1p C-terminus has an important role in separation or splitting of the duplicated SPBs during bipolar spindle assembly.
Statistics
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PSSM-Id: 439387
Aligned: 6 rows
Threshold Bit Score: 150.646
Created: 27-May-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
centrin binding
Conserved site includes 47 residues -Click on image for an interactive view with Cn3D
Feature 1:centrin binding site [polypeptide binding site]
Evidence:
  • Structure:2DOQ; Saccharomyces cerevisiae Sfi1p-centrin complex; contacts at 4A.
  • Comment:The Saccharomyces cerevisiae centrin, Cdc31p, binds Sfi1p on multiple conserved repeats; both proteins localize to the yeast spindle pole bodies (SPBs) half-bridge, where the new SPB is assembled.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  ## #    #  ### ######  ## ##   #  #  ### ##########  ##  #  ### ### ## ###   
2DOQ_D         6 NEEANRFANQAKLRVQEAVFYIWSDKTLKYSQXANDEAESFRNTWLLFRSFQQWITLTQTFKEQSRLADQAFLNKXFRKI 85   Saccharomyces ...
NP_013098    218 NEEANRFANQAKLRVQEAVFYIWSDKTLKYSQMANDEAESFRNTWLLFRSFQQWITLTQTLKEQSRLADQAFLNKMFRKI 297  Saccharomyces ...
AJV50576     218 NEEANRFANQAKLRVQEAVFYIWSDKTLKYSQMANDEAESFRNTWLLFRSFQQWITLTQTLKEQSRLADQAFLNKMFRKI 297  Saccharomyces ...
Q12369       218 NEEANRFANQAKLRVQEAVFYIWSDKTLKYSQMANDEAESFRNTWLLFRSFQQWITLTQTLKEQSRLADQAFLNKMFRKI 297  Saccharomyces ...
GAA24885     218 NEEANRFANQAKLRVQEAVFYIWSDKTLKYSQMANDEAESFRNTWLLFRSFQQWITLTQTLKEQSRLADQAFLNKMFRKI 297  Saccharomyces ...
XP_018220431 215 NYRAYKFADQTKVKLKEAAFYVWSDRKLKYSQMANDEADNFRNTWLLFHSFQQWINLTQTLSEQSRLADQAFLNRMFKKI 294  Saccharomyces ...
Feature 1                 
2DOQ_D        86 LKAQEHWKH 94   Saccharomyces cerevisiae
NP_013098    298 LKAQEHWKH 306  Saccharomyces cerevisiae S288C
AJV50576     298 LKAQEHWKH 306  Saccharomyces cerevisiae YJM1250
Q12369       298 LKAQEHWKH 306  Saccharomyces cerevisiae S288C
GAA24885     298 LKAQERWKH 306  Saccharomyces cerevisiae Kyokai no. 7
XP_018220431 295 IKAREKWKH 303  Saccharomyces eubayanus

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