5FWW,3S2K,3S8V


Conserved Protein Domain Family
Dkk1_Cys2

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cd23272: Dkk1_Cys2 
Click on image for an interactive view with Cn3D
second cysteine-rich (Cys-2) domain of Dickkopf-related protein 1
Dickkopf-1 (Dkk1) is a secreted protein which directly binds to LRP5/6 (low-density lipoprotein receptor related protein 5 and 6), and is an inhibitor of Wnt/beta-catenin signaling. Elevated expression of Dkk-1 may serve as a negative regulator for modulating the wnt/#-catenin signal pathway. Dkk1 is expressed in various human cancers. It has been studied extensively in mouse models of multiple myeloma that results in osteolytic bone lesions. Studies show that Dkk1 levels in bone marrow plasma and serum inhibit the differentiation of osteoblast precursors. Dkk1 belongs to the Dickkopf (Dkk) family that comprises a discrete class of secreted Wnt inhibitors. The Wnt gene family is a large class of secreted proteins that are expressed in a variety of tissues and organs, and are required for many developmental processes, including segmentation, endoderm development, limb polarity, neural crest differentiation, kidney morphogenesis, sex determination and brain development. Dkks 1-4 each possesses an N-terminal signal peptide and contains two conserved cysteine-rich domains (Cys-1 and Cys-2) separated by a linker region. Each domain possesses 10 conserved cysteine residues. The Cys-2 domain is closely similar to those in the colipase family; it has been suggested that the Cys-2 domain of Dkks may enable interaction with lipids in order to regulate Wnt function. This model corresponds to the Cys-2 domain of Dkk1.
Statistics
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PSSM-Id: 437998
Aligned: 27 rows
Threshold Bit Score: 149.07
Created: 14-Jul-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
LRP5/6 binding
Conserved site includes 27 residues -Click on image for an interactive view with Cn3D
Feature 1:LRP5/6 binding site [polypeptide binding site]
Evidence:
  • Structure:3S2K: Homo sapiens Dickkopf-related protein 1 binds two molecules of LDL receptor-related protein 6, contacts at 4A
  • Comment:Cys-2 domain of the Dkks may enable the proteins to interact with lipids in order to regulate Wnt function
  • Structure:5FWW: Homo sapiens Dickkopf-related protein 1 binds LRP6 and Kremen protein 1; contacts at 4.0A
  • Comment:Kremen protein 1 or Kremen1 (KRM1ECD) is a co-receptor for Dkk proteins

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #     #            ### ##        ## ####### ## ### #       ##                
5FWW_C         1 KGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQVCTKHRRKGSHGlEIFQRCYCGEGLSCRIQKDhhq-------- 72  human
3S2K_C         8 KGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQVCTKHRRKGSHGlEIFQRCYCGEGLSCRIQKDhhq-------- 79  human
AAL07515      13 KGEEGDFCLRSSDCAAGLCCARHFWSKICKPVLREGQVCTRHRRKGAHGlEIFQRCPCAEGMACRPQRDrgg-------- 84  chicken
AAI54842     172 KGGEGETCLRSSDCLEGLCCARHFWSRICKPVLTEGQVCTRHRRKGAHGlEIFQRCDCGSGLTCRGQREkpg-------- 243 zebrafish
TWW78605     260 KGMEGDTCLRSADCSEGLCCARHFWSRICKPVLTEGQVCTRHRRKGTHGlELFQRCDCGEGMTCRPERGerdhs------ 333 sansaifugu
TRY57831     164 KGAEGEMCLRSSDCQEGLCCARHFWSRICKPVLSEGQVCTRHRRKATNGlEIFQRCDCRPGLSCRGQRDrvp-------- 235 Danionella tran...
TSK22796     169 KGIEGDMCLRSSDCSRGLCCARHFWSRICKPVLTEGQVCTRHHRKDTHNlEIFQRCDCGQGLMCRAQKEqgsgnqqqsav 248 goonch
KTF92073     172 KGGEGETCLRSSDCLKGLCCARHFWSRICKPVLTEGQVCTRHRKGAHNL-EIFQRCNCGSGLTCRGQREkpg-------- 242 common carp
KPP62390     134 KSLEGETCLRSTDCSKGLCCARHFWSRICKPVLTEGQVCTKHKKKGTHGlEIFQRCNCGDGLACRVQKGdvv-------- 205 Asian bonytongue
XP_030196858 205 RGLEGERCLRSSDCSGGLCCARHFWSKICKPVLREGQVCTKHRKKGALGlEIFQRCDCGAGLACRTQRGaeeqr------ 278 Atlantic cod
Feature 1                              ###   
5FWW_C        73 -----------------asnSSRLHTCQ 83  human
3S2K_C        80 -----------------asnSSRLHTCQ 90  human
AAL07515      85 ------------------pdASRLHTCQ 94  chicken
AAI54842     244 ------------------aeSRNLHTCQ 253 zebrafish
TWW78605     334 ---------------vsrtaARNLHTCQ 346 sansaifugu
TRY57831     236 ------------------eeSRNLHTCQ 245 Danionella translucida
TSK22796     249 qqeqqqkqqprknnnnnnkaTRNLHTCQ 276 goonch
KTF92073     243 ------------------aeSRNLHTCQ 252 common carp
KPP62390     206 -----------------rqsSRTLHTCQ 216 Asian bonytongue
XP_030196858 279 ----------------mhkaARALHTCQ 290 Atlantic cod

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