Conserved Protein Domain Family
RING-HC_BAH1-like

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cd23127: RING-HC_BAH1-like 
RING finger, HC subclass, found in Arabidopsis thaliana protein BENZOIC ACID HYPERSENSITIVE 1 (BAH1) and similar proteins
This subfamily includes Arabidopsis thaliana BAH1 and BAH1-like. BAH1, also known as protein NITROGEN LIMITATION ADAPTATION (NLA), or RING-type E3 ubiquitin transferase BAH1, acts as an E3 ubiquitin-protein ligase that mediates E2-dependent protein ubiquitination. It plays a role in salicylic acid-mediated negative feedback regulation of salicylic acid (SA) accumulation. It may be involved in the overall regulation of SA, benzoic acid and phenylpropanoid biosynthesis. It controls the adaptability to nitrogen limitation by channeling the phenylpropanoid metabolic flux to the induced anthocyanin synthesis. BAH1-like, also known as RING finger protein 178, or RING-type E3 ubiquitin transferase BAH1-like, is a probable E3 ubiquitin-protein ligase. Members of this subfamily contain a typical C3HC4-type RING-HC finger.
Statistics
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PSSM-Id: 438489
Aligned: 7 rows
Threshold Bit Score: 122.893
Created: 9-Jun-2021
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #  #           # #  #  #                     #  #               
Q9SRX9       221 DSVKVDIDLTCSICLDTVFDPISLTCGHIYCYMCACSAASvnvvDGLKTAEATEKCPLCREDGVYKGAVHLDEL 294 thale cress
Q8GW10       221 NSIELEYDLTCAICLETVFNPYALKCGHIFCNSCACSAASvlifQGIKAAPRHSKCPICREAGVYAEAVHMIEL 294 thale cress
ABR18169     242 DSVKLEFNLTCPICLDTVFDPVALGCGHVFCNICACTGASiptiEGLKAANQRARCPICRQMGVYADSVHLTEL 315 Sitka spruce
WP_152928903  23 DSIKIDIDLTCSICLDTVFDPVSLTCGHIFCYSCACSAASativDGLKAADPKEKCPLCREDGVYEGAVRLEEL 96  Escherichia coli
EFJ28164     223 DSQAFEADLTCSICLETLFDPVALGCGHLFCNTCACSAASiptiQGVKSATKEAKCPLCRQPGVYLSAVFLTEL 296 Selaginella moellendo...
PNR27057     252 ESTSLEFDLLCSICLEPLFEPIALGCGHLFCNNCACTASSmlghEGPKTARCDAKCPLCRQIGVYPDGVKLKEL 325 Physcomitrium patens
A2XK56       225 ETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGCACGAASvyifQGVKSAPPEAKCPVCRSDGVFAHAVHMTEL 298 long-grained rice

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