Conserved Protein Domain Family
RING-H2_NIPL1-like

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cd23119: RING-H2_NIPL1-like 
RING finger, H2 subclass, found in Arabidopsis thaliana NEP1-interacting protein-like 1 (NIPL1) and similar proteins
This subfamily includes Arabidopsis thaliana NIPL1 and MISFOLDED PROTEIN SENSING RING E3 LIGASE 1 (MPSR1). NIPL1, also called RING-H2 finger protein ATL27, may be involved in the early steps of the plant defense signaling pathway. MPSR1 is a cytoplasmic E3 ubiquitin-protein ligase involved in protein quality control (PQC) under proteotoxic stress. It is essential for plant survival under proteotoxic stress. It functions by removing damaged proteins before they form cytotoxic aggregates. It recognizes misfolded proteins selectively and tethers polyubiquitin chains to the proteins directly for subsequent degradation by the 26S proteasome pathway. Members of this subfamily contain a C3H2C3-type RING-H2 finger.
Statistics
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PSSM-Id: 438481
Aligned: 5 rows
Threshold Bit Score: 83.7021
Created: 15-Jun-2021
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #               # #  #  #          #  # 
Q9FKX5     175 SCSVCLQDFQVGETVRSLPhCHHMFHLPCIDKWLrrHASCPLCR 218 thale cress
Q9LQX2     112 ECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLgfHGSCPVCR 154 thale cress
ABK24929   215 CCTICLQDLQQGEIARSLPlCHHMFHMSCVDKWLirHGSCPVCR 258 Sitka spruce
EFJ22156   195 CCAICLQELQGGEIARCLPhCQHTYHMDCVDKWLarHGSCPVCR 238 Selaginella moellendorffii
KAA0869746 104 CCTICLQDIVVGDIARSLPhCRHTFHLICVDKWLvkNDSCPICR 147 Enterobacter hormaechei

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