Conserved Protein Domain Family
RING-H2_MBR

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cd23113: RING-H2_MBR 
RING finger, H2 subclass, found in Arabidopsis thaliana MED25-binding RING-H2 protein (MBR) and similar proteins
This subfamily includes MBR1 and MBR2 (also called HAL3-interacting protein 1 or AtHIP1). They are E3 ubiquitin-protein ligases that function as regulators of MED25 stability by targeting MED25 for degradation in a RING-H2-dependent manner. Proteasome-dependent degradation of MED25 seems to activate its function as a positive regulator of FLOWERING LOCUS T (FT) and is important to induce the expression of FT, and consequently to promote flowering. MBR2 may also function downstream of HAL3 and be required for HAL3-regulated plant growth. Activation of MBR2 by HAL3 may lead to the degradation of cell cycle suppressors, resulting in enhancement of cell division and plant growth. Both MBR1 and MBR2 contain a C3H2C3-type RING-H2 finger.
Statistics
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PSSM-Id: 438475
Aligned: 4 rows
Threshold Bit Score: 115.359
Created: 14-Jun-2021
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #              # #  #  #          #  #     
Q9ZQF9       652 NIEPCCICQEEYVEGDnlGTLKCGHEFHKDCIKQWVMIKNlCPICKTEAL 701  thale cress
O49500       615 DMEPCCVCQEEYAEGDdlGTLGCGHEFHTACVKQWLMLKNlCPICKTVAL 664  thale cress
XP_002988343 641 SDVKCCVCQEEFEEGVelGTINCGHNYHMDCIRQWLVRKNsCPICKATAL 690  Selaginella moellendorffii
XP_024403689 871 SDIKCSICQEEYEEGDelGKIECGHGYHSQCIQQWLVQKNqCPICKATAL 920  Physcomitrium patens

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