7JTK,7JTK,7JRJ,7JTK,7JRJ


Conserved Protein Domain Family
DD_CrRSP4-like

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cd22963: DD_CrRSP4-like 
Click on image for an interactive view with Cn3D
dimerization/docking (D/D) domain found in Chlamydomonas reinhardtii flagellar radial spoke protein 4 (RSP4) and similar proteins
Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules. The radial spoke head is made of five different polypeptides (RSP1, RSP4, RSP6, RSP9, and RSP10). This family includes the radial spoke head proteins RSP4 and RSP6 from Chlamydomonas reinhardtii, and several eukaryotic homologs, including mammalian RSHL1 (also called RSPH6A) and RSHL3 (also called RSPH4A), the protein products of familial ciliary dyskinesia candidate genes. RSHL1 is essential for sperm flagellar assembly and male fertility. RSHL3 is a component of the axonemal radial spoke head which plays an important role in ciliary motility. It is required for triplet radial spokes (RS1, RS2 and RS3) head assembly in the motile cilia. Members of this family contain an N-terminal domain which shows high sequence similarity to the dimerization/docking (D/D) domains of regulatory subunit of cAMP-dependent protein kinase (PKA) and protein DPY-30/SDC1.
Statistics
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PSSM-Id: 438532
Aligned: 107 rows
Threshold Bit Score: 55.57
Created: 30-Apr-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimeroligomer
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:7JTK: Chlamydomonas reinhardtii RSP4 and RSP6 D/D domains form a heterodimer within the radial spoke 1; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #  ##          #   #   #  ##  ##  ### #  #     
7JTK_L         4 DVGQALAFLQQVKTtqGASIYEGLKAALAKVLEDRPVNAVEALETSVLSTP 54  Chlamydomonas reinhardtii
CCI47665       2 QFEEAKAFLQQNTSn-GTNLYEHLTNLLLKIIVERPENAIEIFEFLSVTAR 51  Albugo candida
OQR99877       5 TIDEAKAYLRQTVG--GVNLYDHLSEVLLKLLVERPNDAVNAFEHLSCTVR 53  Thraustotheca clavata
GBG32879       3 DFEVAKAFLLKDQD--GSNLFDHVADVLLKVISERPENALQVFEQLSASVK 51  Hondaea fermentalgiana
KAA0147853     3 DFEAAKAFLQTKED--GVSLFDHLTEVLLKVITEHPENAVEHFERISAAVK 51  Cafeteria roenbergensis
XP_009040791   2 SFEEAKQYLRQEDEd-GNSLYEHLSRVLLKVIVEKPQNANAMFEQLSQELR 51  Aureococcus anophagefferens
TYZ62630       3 TLEEAKAFLKQESVd-GTNLYDHLSDVLLKILVERPENLNDTFESISAAVK 52  Pythium brassicum
RYG59058       3 TAAELRQLLKEDTS--GQNLYDHLTQTLMRILIERPKNAYESFELISANIK 51  archaeon
XP_004035110   1 MSTFLKQQLEQVVDneGRNLYNHLSNVLTKLVLDEPKNAYDVLEDYSHHVK 51  Ichthyophthirius multifiliis
VVC28841      72 DIDYAIHLLKKEDQ--NINVYSHLKSILDKLLVEKPKNPLETFEEYSHLLK 120 Cinara cedri

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