5XTD,5XTC


Conserved Protein Domain Family
NDUFA3

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cd22902: NDUFA3 
Click on image for an interactive view with Cn3D
NADH dehydrogenase 1 alpha subcomplex subunit 3
NADH dehydrogenase 1 alpha subcomplex subunit 3 (NDUFA3) is a subunit of the of NADH:ubiquinone oxidoreductase (Respiratory complex I), which is a redox-driven proton pump that plays an important role in creating the electrochemical gradient that powers mitochondrial adenosine triphosphate synthesis. Subunit NDUFA3 is a single-pass membrane protein and is considered an accessory subunit. NDUFA3, along with subunit NDUFA5, have been shown to be necessary for assembly and/or stability of the matrix arm of human mitochondrial complex I.
Statistics
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PSSM-Id: 438577
Aligned: 7 rows
Threshold Bit Score: 115.316
Created: 22-Feb-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 43 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:5XTD; Homo sapiens NDUFA3 subunit of the respiratory complex I, interactions with other subunits of the complex, contacts 4A
  • Comment:The NDUFA3 subunit interacts with chains 1, 3 and 6 and the subunits NDUFA1, NDUFA8, NDUFA13, NDUFB2, NDUFS2, NDUFS5 and NDUFS8.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  ##  ##   #  #  ###  #    ##  ## ### ###########           ##  #######  #
5XTD_U         4 VGAFLKNAWDKEPVLVVSFVVGGLAVILPPLspYFKYSVMINKATPYNYPVPVRDd---------gNMPDVPSHPQDPqG 74  human
5XTC_U         4 VGAFLKNAWDKEPVLVVSFVVGGLAVILPPLspYFKYSVMINKATPYNYPVPVRDd---------gNMPDVPSHPQDPqG 74  human
NP_001003516   4 VGRLLKYMWDKEPVIAVSCVIGVAACIVPFVspYTKYTAMMNKAVPYNYPVPVRDd---------gNMPDVPAHPSDPqG 74  zebrafish
XP_016882322   5 VGAFLKNAWDKEPVLVVSFVVGGLAVILPPLspYFKYSVMINKATPYNYPVPVRDd---------gNMPDVPSHPQDPqG 75  Homo sapiens
XP_006000683   7 VGAFLKNAWAKEPLIVVSFGIGAMAIILPFVspYTKYQGMINSATPYTYPVPVRDd---------gNMPDVPSHPCEKkG 77  coelacanth
NP_001087345   7 VGTFLKNAWAKEPVITVSAAIGILAVAVPLVspYTKYTALLNQSTPYNYPVPVRDd---------gNMPDVPGRPTEKlG 77  African clawed ...
XP_014150546   2 TMSFMLNAWRTQPVIFMSFVFTGFGLLSFYAg-PIRYKKGYDYTPPLSYPGEYYVfcsidfdmfqtSFFNLSDRYQSPlK 80  Sphaeroforma ar...
Feature 1          #  ## #
5XTD_U        75 PSLEWLKKL 83  human
5XTC_U        75 PSLEWLKKL 83  human
NP_001003516  75 SNLEWLKNL 83  zebrafish
XP_016882322  76 PSLEWLKKL 84  Homo sapiens
XP_006000683  78 PNLEWLKNF 86  coelacanth
NP_001087345  78 PNLDWFKNM 86  African clawed frog
XP_014150546  81 CMRYWDDRL 89  Sphaeroforma arctica JP610

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