6YJ4,5XTC,5XTD


Conserved Protein Domain Family
NDUFA3-like

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cd22889: NDUFA3-like 
Click on image for an interactive view with Cn3D
NADH:Ubiquinone Oxidoreductase, NDUFA3 subunit and related proteins
This family includes the NDUFA3 subunit of NADH:ubiquinone oxidoreductase (Respiratory complex I), which is a redox-driven proton pump that plays an important role in creating the electrochemical gradient that powers mitochondrial adenosine triphosphate synthesis. Complex I catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD(+) + ubiquinol). Subunit NDUFA3 is a single-pass membrane protein and is considered an accessory subunit. This family also includes N9IM, the homologous subunit from fungi, as well as some plant homologs.
Statistics
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PSSM-Id: 438576
Aligned: 6 rows
Threshold Bit Score: 63.7882
Created: 6-Mar-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 26 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:6YJ4; Yarrowia lipolytica NI9M subunit of protein NADH:Ubiquinone Oxidoreductase (Complex I) interacts with other subunits of the complex, contacts 4A
  • Structure:5XTD; Homo sapiens NDUFA3 subunit of the respiratory complex I interacts with other subunits of the complex, contacts 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  ## ### ##  ##  ##  ## ##      ##         ########
6YJ4_b           12 PFRYLRWSAHNRPHLFFAFAIGIAGPVAALtltplRRKYlypdhsPLPQSYPLP 65  Yarrowia lipolytica
5XTC_U            4 VGAFLKNAWDKEPVLVVSFVVGGLAVILPPls--pYFKYsvminkATPYNYPVP 55  human
5XTD_U            4 VGAFLKNAWDKEPVLVVSFVVGGLAVILPPls--pYFKYsvminkATPYNYPVP 55  human
JCVI:AT2G46540.1  3 VMEKLRMFVAQEPVVAASCLIGGVGLFLPAvvrpiLDSLeaskqvKAPPLTDVI 56  Arabidopsis thaliana
XP_009142422      3 VMGKLRMFVAQEPVVAASCLIGGVGLFLPAvvrpiLDSLeaskqvKAPPLTHVI 56  Brassica rapa
Q9ZPY5            3 VMEKLRMFVAQEPVVAASCLIGGVGLFLPAvvrpiLDSLeaskqvKAPPLTDVI 56  thale cress

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