6RFQ


Conserved Protein Domain Family
NuzM

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cd22849: NuzM 
Click on image for an interactive view with Cn3D
NuzM subunit of NADH:Ubiquinone Oxidoreductase
The NuzM subunit is a fungal specific subunit of NADH:ubiquinone oxidoreductase (respiratory complex I) which is a redox-driven proton pump that plays a central role in aerobic energy metabolism. Redox-linked proton translocation by complex I creates the electrochemical gradient that powers mitochondrial adenosine triphosphate synthesis. Loss of NuzM leads to disassembly of fungal complex I, thus making it a potential antifungal drug target.
Statistics
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PSSM-Id: 439366
Aligned: 58 rows
Threshold Bit Score: 133.519
Created: 6-Mar-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 60 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:6RFQ; Yarrowia lipolytica NuzM subunit interacts with other subunits in the NADH:ubiquinone oxidoreductase complex, contacts 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #  ########## # #######
6RFQ_Z        17 SKGIWEKLRVLLAIAPNRSTGNPIvplYRVPTPGSRPea-----------nvYQDPSSYPTNDIAENPYWKRDHRRAYPQ 85  Yarrowia lipoly...
RPB24039      17 SRGVWEKIRRFLAIDPNRSTGVPInakFRIPAPGSVSpy------------dYDDPVTLPAADIAGNPYWKRDNRRNYPQ 84  Terfezia boudie...
XP_018225052  13 KSGFWSWLRRWLVIDPERSSGITYnnqYRKPAPGTPEr-------------iYSMPSNLPASDISDNPYWKRDMRRNYPR 79  Pneumocystis ca...
P19968        28 SVGVWERIRRAFAIDPNRSNGVPLvpyNRNPSPGSLDpl------------aYDDPVTIPAGDIADNPYWKRDARRNYPR 95  Neurospora cras...
XP_018191215  27 STGIWERIRRALAVDPNRSTGVPLnplFRNPTPGGIDpk------------dYDMGIIVPAQDIAENPYWKRDTRRSYAQ 94  Xylona heveae T...
RPA86220      20 STGFWEVIRRFLAVDPNRSTGVPLnplFRWPTPGRPTp--------------YTDPVTVPAADIANNPYWKRDVRRNYAR 85  Ascobolus immer...
EPS41596      19 STGIWERIRRFFAIDPERSTGVPYiaqYRNPAPGHLPqp------------pYHDPVTIPSGDIADNPYWKRDNRRAYPK 86  Dactylellina ha...
GAO52235      74 PKGIWARISNFFSIDPNRSTGIPLnptYRVPAPGSRSe-------------rFQEPVTAPASDIAENQYFNRDVRRQYPR 140 Saitoella compl...
OLL26417      14 STGFWAKLKNLLAVDPNRSSGIPInskYRRPHPGSIShsysepgtffrrythANDGVAIPSGDIAENPYHQRDVRRAYPR 93  Neolecta irregu...
ORY79090      11 PPGLWSKVKDFFALDKTRSSGISFnesYRNPMPGSRPe-------------iYKEPVTAPANDIAENPYFARDVRRQYPS 77  Protomyces lact...
Feature 1        ###### ## ##  ##  # #          ##  #           ##  #           ###          ####
6RFQ_Z        86 TAFFDQKTVTGLLELGseATPRIAd---GEAGTKALANIAngg--vsFTQALGkss--kdVIYGEVltv----nglPPVA 154 Yarrowia lipoly...
RPB24039      85 LSTVTQQDVVGLLELGskAAPRIAd---GEQGMKQLAEVKqgs--vvLAEVLKrkg-etgMLAKEVlge----ngmPPLP 154 Terfezia boudie...
XP_018225052  80 PGIITQPILAKLLVLGsvEHPKIP----EPSETEAQTTTPa------ITQSLStil--ynTEPAEIqklvltdkgvAPHP 147 Pneumocystis ca...
P19968        96 LSVVGQAEAVALLSVGsaSHPRVEl--vGENGSKQLVAAQeagktggLAKYFEgt----gVEAGKLvlae--tgglPPLP 167 Neurospora cras...
XP_018191215  95 PSIVKPADVVGLLSVGskAAPQEDklqiGEAGTRQLTQIKeegegkgLSTFFEnn----kSTISNVlgq----dglPPSP 166 Xylona heveae T...
RPA86220      86 QSVITQGKIVGLLECGskAAPKIAd---GEKGATQLTVVEkee--gkLGSVLK-------ADPSKIkevla-eeglPPAP 152 Ascobolus immer...
EPS41596      87 LSVVTQSDAAGMLLLGtaAAPRIAd---GAAGEKQLVEIKeq----nLVDVLKq------VGNSGLlla----nglPPVP 149 Dactylellina ha...
GAO52235     141 LAVTDQSTLAGLLTLGsaEAPRTEl--iGESGAKDLVAAQek----cLAEVVQer---gaAVLEKYqg-------fAPLP 204 Saitoella compl...
OLL26417      94 TAVFTQSHIAGLLAYGskEAPQISd---GKEGETQLAIVAdl----nLAKVLDe-----rKVVKSR----------PPTP 151 Neolecta irregu...
ORY79090      78 VSVFTQSRVAGLLTYGnkDAPAIPd---GKAGELVLAKIDel----qLTSALEqqgvlavLGKDGM----------PPLP 140 Protomyces lact...
Feature 1        ##       # # ##         ##     ###### 
6RFQ_Z       155 PTla----pKQWKIIEGea---aiYPKG---YPCRTFH 182 Yarrowia lipolytica
RPB24039     155 GKg------MTWAMHTDg-----gFPPE---YPCRIFK 178 Terfezia boudieri ATCC MYA-4762
XP_018225052 148 GNs------YHWTLDNKs-----gYPST---YPVRTFR 171 Pneumocystis carinii B80
P19968       168 SGekl-gegGKWDVYKYql---aeEPSYseaYPCRSFS 201 Neurospora crassa OR74A
XP_018191215 167 ANlarksegKKYEISTGe-----gYPEE---YEIRTFV 196 Xylona heveae TC161
RPA86220     153 GVg------VKWNIDSTv-----gYEGN---YPCRSFV 176 Ascobolus immersus RN42
EPS41596     150 GQa------VQWTQQTGsw---aaYPNK---YPCRTFT 175 Dactylellina haptotyla CBS 200.50
GAO52235     205 GTgk---ggHHWTLNKSegfdtnsMSHGs-gWSWTVIC 238 Saitoella complicata NRRL Y-17804
OLL26417     152 NTp------CLWELDQTe-----gFSPD---YPVRTFK 175 Neolecta irregularis DAH-3
ORY79090     141 MGrk----gRAFKLDTTagfagntMAHGv-dYPVRCFN 173 Protomyces lactucaedebilis

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