Conserved Protein Domain Family
Complexin_NTD_CPLX_III_IV

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cd22809: Complexin_NTD_CPLX_III_IV 
N-terminal SNARE complex binding domain found in complexins III and IV
Complexins (CPXs) are small, cytosolic proteins that bind to the soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) complex to regulate synaptic vesicle exocytosis. Complexins III (CPX III) and IV (CPX IV) are the only CPX isoforms present in retinal ribbon synapses. They carry an extension with a functional CAAX-box farnesylation site that is absent in CPXs I and II. Their C-terminal farnesylation regulates their synaptic targeting and modulatory function in transmitter release. They may contribute to the unique release efficacy of retinal sensory neurons. CPXs III and IV can functionally replace CPXs I and II, which regulate a late step in the release process, most likely by stabilizing SNARE complexes and thus maintaining synaptic vesicles in a highly release competent state. This model corresponds to the N-terminal SNARE complex binding domain of CPXs III and IV.
Statistics
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PSSM-Id: 439283
Aligned: 28 rows
Threshold Bit Score: 59.5745
Created: 29-Oct-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative SNARE
Feature 1:putative SNARE binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Rattus norvegicus complexin 1 forms a complex with SNARE

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #      #      #   #   #  #  ##  #  ####   
Q7Z7G2        43 EEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKS 86  human
NP_001081171  49 SSEEQHERRLQADMETRDSLYAQRKAERAMMREQMRSKYHLPKS 92  African clawed frog
XP_018420729  43 SSEDQRHRLLRPETTRRSSLHSQQKAERALMREHFREKYKLPMN 86  Nanorana parkeri
CAF97876      66 VVVRSYQAELEKERKLREAANARKNAQRAAMRAHFRRKYQLSEN 109 spotted green pufferfish
XP_026545200  33 SWEPVKLQSHPRQKAERDAAFARQKTQRASLRAHLREKYNLPKN 76  mainland tiger snake
TFJ97918      38 KGPAEQNQRTQGKKSKRDVVYAQRKAERAAIRTHIREKYQLPKN 81  big-headed turtle
XP_030226423 109 AAPRSHQPGLDPERKPREGLNAKKNAERAALRAHYRRKYQLTRS 152 Atlantic cod
KPP79239      68 KERQVDELFFRCRLKLREARNAQKNAERAAMRAHYRSKYRLPKN 111 Asian bonytongue
XP_023685839  47 AQMRSYRADLEKERKLRAARDVQRNAERAALRAHYRSKYRLAES 90  Paramormyrops kingsleyae
NP_001038400  51 SWLRTYQAELHRERKHRQAKFAQKNAERAAMRVHYRSPHRYAKP 94  zebrafish

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