1KIL,3RK3,1L4A,5W5C


Conserved Protein Domain Family
Complexin_NTD_CPLX_I_II

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cd22808: Complexin_NTD_CPLX_I_II 
Click on image for an interactive view with Cn3D
N-terminal SNARE complex binding domain found in complexins I and II
Complexins (CPXs, also called synaphins) are small, cytosolic proteins that bind to the soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) complex to regulate synaptic vesicle exocytosis. Complexins I and II, also called synaphin-2 and synaphin-1, respectively, are highly homologous hydrophilic proteins that are enriched in neurons where they colocalize with syntaxin and SNAP25. They regulate the sequential interactions of alpha-SNAP and synaptotagmins with the SNAP receptor during exocytosis. They preferentially bind to syntaxin within the SNARE core complex containing SNAP25, VAMP2 and STX1A. This model corresponds to the N-terminal SNARE complex binding domain of complexins I and II.
Statistics
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PSSM-Id: 439282
Aligned: 28 rows
Threshold Bit Score: 43.1476
Created: 29-Oct-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
SNARE binding
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:SNARE binding site [polypeptide binding site]
Evidence:
  • Structure:1KIL; Rattus norvegicus complexin 1 in complex with SNARE, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #      #      #   #   #  #  ##  #  ####
1KIL_E         9 KKEEERQEALRQAEEERKAKYAKMEAEREVMRQGIRDKYGI 49  Norway rat
Q8IPM8        37 EEERERQEAIKEAEDRRKEKHRKMEEEREKMRQDIRDKYNI 77  fruit fly
Q9GUM7        34 GEDPEVIAARLEQEERRKEKHRKMENEREKMRQGIRDKYAI 74  Caenorhabditis elegans
GAA37888      35 EIDPEVEAALREAEARREAKHQKMEEEREVMRQEIRDKYGI 75  Clonorchis sinensis
XP_013392898  36 GEDPEVAEARREAEEKRIEKHRKMEEEREELRQGIRDKYGI 76  Lingula anatina
RNA31259      39 AEDPELIEQRREEEERRRNKYAKMEAEREKVRKDIRDKYNI 79  Brachionus plicatilis
RXG57740      58 EAERERLEAMREAEDRRKEKHRKLEEERESMRQGIRDKILI 98  common pillbug
XP_029306117  31 FVVPEAVDQHQLEEKERKGKYSKMEAERESMRQGIRDKYGL 71  Cottoperca gobio
GBN57885      34 EEEQERLEALREAEERRKEKHRKMEEEREKMRQEIRDKVLI 74  Araneus ventricosus
XP_030536229  37 EEERERLLALQEAEDLRKEKHRKLEEEREKMRGGIREKYNI 77  Rhodamnia argentea

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