4GVB


Conserved Protein Domain Family
KP6_beta

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cd22805: KP6_beta 
Click on image for an interactive view with Cn3D
KP6 killer toxin subunit beta
KP6 is an anti-fungal protein produced by a double-stranded RNA virus. It is a neutral protein lethal to sensitive cells of the same or related species. KP6 is composed of two subunits: KP6alpha and KP6beta, which are produced after cleavage from a single precursor preprotoxin. The KP6alpha subunit is responsible for targeting while the KP6beta subunit is cytotoxic. KP6alpha can recognize some cellular receptors before interaction of the complex with KP6beta, precipitating cell death. Neither subunit is homologous in either sequence or structure to any other known cytotoxic protein, however, they have highly similar structures to each other. The major difference between the two subunits is that KP6alpha contains a hydrophobic helix at the N-terminus, which plays a key role in target recognition. This model corresponds to the KP6beta subunit.
Statistics
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PSSM-Id: 439307
Aligned: 3 rows
Threshold Bit Score: 158.333
Created: 27-Oct-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimer
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:4GVB; Ustilago maydis virus P6 KP6 subunits alpha and beta form a heterodimer, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ##      # ##                                        #####           
4GVB_B      4 PRPVMCQCVDTTNGGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSWDlFTSGQFYQACLRYSHaGTNCQPDPQY 80  Ustilago maydis virus P6
P16948    142 PRPVMCQCVDTTNGGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSWDlFTSGQFYQACLRYSHaGTNCQPDPQY 218 Ustilago maydis virus P6
AAB26392  142 PRPVMCQCVDTTNGGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSWDlFTSGQFYQACLRYSHaGTNCQPDPQY 218 Ustilago maydis

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