5OE7,6DRM


Conserved Protein Domain Family
OTU_OTUL-like

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cd22790: OTU_OTUL-like 
Click on image for an interactive view with Cn3D
OTU (ovarian tumor) domain of ubiquitin thioesterase otulin family
Otulin family includes otulin and otulinl. Otulin, also called FAM105B, deubiquitinating enzyme otulin, OTU domain-containing deubiquitinase with linear linkage specificity, or ubiquitin thioesterase Gumby, is a deubiquitinase (DUB)/ubiquitin thioesterase (EC 3.4.19.12) that specifically removes linear ('Met-1'-linked) polyubiquitin chains to substrates and acts as a regulator of angiogenesis and innate immune response. It acts as a key negative regulator of inflammation by restricting spontaneous inflammation and maintaining immune homeostasis. Otulinl, also called FAM105A, is an OTU-class pseudo-deubiquitinase with a disrupted catalytic triad and undetectable cleavage activity for any diubiquitin linkage. It may play a role in endoplasmic reticulum (ER)-organelle communication. Otulin and otulinl belong to the OTU family of cysteine proteases that use a conserved cysteine and histidine, and in some cases an aspartate, as the catalytic dyad (or triad).
Statistics
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PSSM-Id: 438611
Aligned: 24 rows
Threshold Bit Score: 358.075
Created: 24-Apr-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
putative active
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: putative active site [active site], 4 residue positions
Conserved feature residue pattern:[DE] C H NClick to see conserved feature residue pattern help
Evidence:
  • Comment:Active site residues have been identified from the tertiary structure of human otulin/FAM105B isopeptidase: Asp126, Cys129, His339, Asn341.
  • Comment:Although highly similar to the deubiquitinase OTULIN, it lacks the conserved active site Cys at position 139 which is replaced by an Asp residue, and does not show deubiquitinase activity. It does not bind ubiquitin or ubiquitin-like proteins.
  • Comment:The key residues are conserved in some family members.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #  #                                  
5OE7_A         13 DYCKKEWRgn----tQKATCMKMGYEEVSqk--fTSIRRVRgDNYCALRATLFQAMSQavglppwlqdpelmlLPEKLIS 86   human
XP_013380514  583 TYAEQEWKgt----tKTADAMKKGYHAIVeqlgfKHMRCVRgDNYCAIRAALYQAIIHkvpileh--fgklksLSKALEN 656  Lingula anatina
XP_013092455  615 DYAEEQWKgn----tDKAKTVKEGYSKIPrllscHRMCVIRgDNYCALRSVLFQVLANgqrvtqh--wsgiigIMDSLHK 688  Biomphalaria ...
KOF78173      617 EYAKNQWRge----tPEAQRYLEAYNQVQqtfecNYIRVMRgDNYCGIRSCIVQVLINgiamkq---efataeIVKNLLN 689  Octopus bimac...
XP_021378029  617 DYAEREWKge----tDKASTIKQAYTEVVkmipcQNLQPIRgDNYCGIRGCVFQCLSNmlsprca--wrsldhTLSLLHA 690  Yesso scallop
XP_022308633   21 EYCKTEWRgq----tKRAAIMQKAYQEIPnltdcSHLHQIRgDNYCGIRGTLLQCFIQninvlsk--wsstesVINRLQT 94   eastern oyster
PVD33777      561 DYANQEWKgq----tKNTETIKQGYLAIPelfgcQNLRRIRgDNYCALRSTLYQVLVGghkvtqr--wpglisIIDCLHT 634  Pomacea canal...
XP_009052063   19 QYSESEWKgd----tQKAVVIKQAYKELPsitncNNIRAIRgDNYCAIRGCVYQMLTCgsmdask--lpgmmcIIDTLHE 92   owl limpet
XP_023239987  866 EYSFLTWKge----tLKNKQIRKGYEEIAeafgfKYLRVIHkDDYCAIRAALFQVLSQglpvlnh--hnsaklIYQKLQR 939  bark scorpion
XP_022256486  721 SIEELVCKmqerkavSHLDVLTKGYAQIIssygwKKLRMIKrDEYCALRASLFQVLSRglpvlqr--yggastVYQVIKV 798  Atlantic hors...
Feature 1                                                                                         
5OE7_A         87 ky-----nWIKQWKLGlkfdg--knedLVDKIKESLTLLRKKWAGLaemrtaEARQIACDELFTne---aEEYSLYEAVK 156  human
XP_013380514  657 aavethpyIAKKWTFAhrlphvknqddFLPTMHTCVQTFFKQVEESqngateLERESKLLKILNddedcfSDICMMEAVK 736  Lingula anatina
XP_013092455  689 mhgd-ptvALSNWTFAnrlpd--hcedKLGSLCKCALSLYATIEEVctltshEERVARTISVLNtn--etLDLELMEGLK 763  Biomphalaria ...
KOF78173      690 qyleepewELKRWSFArrln----ytdVKEMLFSCIDEFYSQHNLAlem-dkTEREDWVEDLLNre--piVDIKIMEAAK 762  Octopus bimac...
XP_021378029  691 tytd-pasSLHCWTFAsrlt----pqePLSQMQACLTYLFSKFEDAeqmsayEERRLWATSLLNsd--paGDVMLMEGVK 763  Yesso scallop
XP_022308633   95 lyrn-pnsGLSQWTFAhrlpf--nkkdKLPTMSECVQCLFLKFSECqslstdVERNSWPVNLLNsd--tkVDLQCMEAIK 169  eastern oyster
PVD33777      635 lnad-qnsGLQIWNFGnrlkw-dkdedRFSLICKCVLTLYATVEEIsalpsqDMREYRTFSLLNgs--qqFDVELMEGMK 710  Pomacea canal...
XP_009052063   93 lyed-pssGLSQWTFAnrlkc--tgenKLSTLCRCVLTLFSKLSTY------KEREEMTLNLLNah--pdTDIEIMEGVK 161  owl limpet
XP_023239987  940 widg-typWLTEWDFGenlsy--tgseCMQGFYNCLHVLQSVEEELkr---cAGREDRLTELLNrr--pdVDAHLMQAVR 1011 bark scorpion
XP_022256486  799 vp----clYLDCIVSLkvvpc--lyldCIISLRGSSFLIFFQEKEVas--ttADVEDFLVAKLNnn--ptLDTHLMEAVK 868  Atlantic hors...
Feature 1                                                                                         
5OE7_A        157 FLMLNRAIELYNDKEKgkevPFFSVLLFARDTSNDPGQLLRNHLNqvGHTGGLEQVEMFLLAYAVRHTIQVYRLSKynTE 236  human
XP_013380514  737 ILMMLKAIQLYGDYQNgggvPTFVWLMFARDTSETPEAFLTNHLNcvGDSAGLEQIEMFLLAHTLGVTIQVARPSKhgAE 816  Lingula anatina
XP_013092455  764 AMMLIELFKLRRRIDDeedvPIFAHLLFARDSSMTLSDFLKNHLNcvGDTGGLEQVELCLLGQALGIQIRVLRLSQsgQE 843  Biomphalaria ...
KOF78173      763 LLMMLDIIDIYKNQQAed-yPLFVHYIFSRDTSDTPAKLLKNILNavGDSGSLEQIDMCLLGHALGVKITVPRLYRygRD 841  Octopus bimac...
XP_021378029  764 LLMLLEAVRLYNRSQTgadvPLFVWLMFARDTSDTPAKFVTNHLNcvGDTAGLEQVEMFLLGHVLGVSIQVFRLSQfgQD 843  Yesso scallop
XP_022308633  170 LLMFLEAHSLYEASQRgddvPVFVWLLFARDTSENLESLVKNHINpvGDSGGLEQIEMILLGYTLKLSIKVFRLQQygEE 249  eastern oyster
PVD33777      711 LMMLLYMADIQKQIAEeaevPLFAWLLFARDTSSNVVDFVKHHLNpiGDSAGMDQVEMCLLGHCLGVKLRVARLYHhgQE 790  Pomacea canal...
XP_009052063  162 LLMLVKAVELFRDNQKgkdlPIFANLMFARDTSDSISKFVLNHLNpvGDSSGLEQVEMCLLGQTISTIIRVARLSHfgAE 241  owl limpet
XP_023239987 1012 ILMMVSALKFRRAFLRrrtvPVFAALLLAPDDSPRPGEFLRRRPNraGKGAGIDEAEMCLLGHSLSVVLRVIRPHRrgRE 1091 bark scorpion
XP_022256486  869 LLMLVSAIELYPRYQSqenlPVFIWLLFARATSRTPKDLMLNHLNvlKETKHIKEVELYLLGYSLFVTLKVFQLLHygSN 948  Atlantic hors...
Feature 1                                  # #   
5OE7_A        237 EFITVYPTDppkDWPVVTLIAEDDRHYNIPV 267  human
XP_013380514  817 DFITYYPDDmrdQFPTVTVIAEDDRHYNVAL 847  Lingula anatina
XP_013092455  844 DFDCLFPDDappEWPVVSLIAEDDRHYNVPL 874  Biomphalaria glabrata
KOF78173      842 DFIHGFPDLlnqNWDEVYLITEDDRHYNIII 872  Octopus bimaculoides
XP_021378029  844 DFVTFYPDNqqeQWPVISLLAEDDRHYNVAV 874  Yesso scallop
XP_022308633  250 DFITYYPEEtrdSWPQVTLIAEDDRHYNTPV 280  eastern oyster
PVD33777      791 DFDCCFPDDtpaVWPSVCLLTEDDRHYNVPV 821  Pomacea canaliculata
XP_009052063  242 DFLCDFPSRe-nDWPSIYLLAEDDRHYNVPT 271  owl limpet
XP_023239987 1092 DFVTRYPQEefpSGPEVTLIEENPRGYHVPV 1122 bark scorpion
XP_022256486  949 NFVTHYPEWnigTWPEILLIAENDLHYNTIV 979  Atlantic horseshoe crab

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