2PI8,4WJT


Conserved Protein Domain Family
DPBB_MltA_YuiC-like

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cd22784: DPBB_MltA_YuiC-like 
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double-psi beta-barrel fold of membrane-bound lytic murein transglycosylase A (MltA) and YuiC-like proteins
This family includes two subfamilies of conserved double-psi beta-barrel (DPBB) domain proteins, such as membrane-bound lytic murein transglycosylase A (MltA)-like proteins and YuiC-like proteins. MltA, also called murein hydrolase A, is a murein-degrading enzyme that may play a role in the recycling of muropeptides during cell elongation and/or cell division. It degrades murein glycan strands and insoluble, high-molecular weight murein sacculi. Bacterial lytic transglycosylases (LTs) are classified into 4 families: family 1 includes slt70 MltC-MltF, family 2 includes MltA, family 3 includes MltB, and family 4 includes proteins of bacteriophage origin. MltA is distinct from other bacterial LTs, which are similar in structure and sequence with a lysozyme-like fold. MltA is a kidney bean-shaped monomeric protein comprised of two domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, which corresponds to a double-psi beta-barrel (DPBB) fold. Domain B also has a beta-barrel fold topology, but it is inserted within the linear sequence of domain A. YuiC is a Firmicute stationary phase survival (Sps) protein that closely resembles the Barwin-like endoglucanase beta barrel of MltA. It is a DPBB fold that consists of two interlocked "psi-structure" motifs related by a pseudo-2-fold axis and may be involved in substrate binding and catalysis.
Statistics
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PSSM-Id: 439261
Aligned: 64 rows
Threshold Bit Score: 59.1976
Created: 13-Nov-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PI8_A        96 VQFTGYYtpviqarhtrqgefqypiyrxppkrgrlssraeiyagalsdkyilaysnslxdnfixdvqgsgyidfgdgspl 175 Escherichia col...
OGY25985     106 VWITFYDcdve--------------------------------------------------------------------- 116 Candidatus Woyk...
WP_009962421  36 VRTTAYThtesdh------------------------------------------------------------------- 48  Verrucomicrobiu...
AGE55955     126 CKLTFYTddpge-------------------------------------------------------------------- 137 Acanthocystis t...
PYS49262      97 YNATSYSrp----------------------------------------------------------------------- 105 Acidobacteria b...
OON98205     152 AIVTFYTglaaen------------------------------------------------------------------- 164 Epulopiscium sp...
PYP65769      67 VLVTAYCls----------------------------------------------------------------------- 75  Gemmatimonadete...
WP_057232392 104 FIISFYTntkde-------------------------------------------------------------------- 115 Clostridium per...
PTY01046     396 ACITVYWpgdpsgg------------------------------------------------------------------ 409 Verrucomicrobia...
OGG02884      31 VWITGYTeafkytgr----------------------------------------------------------------- 45  Candidatus Gott...
2PI8_A       176 nffsyagknghayrsigkvlidrgevkkedxsxqairhwgethseaevrelleqnpsfvffkpqsfapvKGASAVPLv-- 253 Escherichia col...
OGY25985     117 -----------------------------------------------------------------gyctATASGVTLkeg 131 Candidatus Woyk...
WP_009962421  49 ----------------------------------------------------------------ikygpKAATGDTLky- 63  Verrucomicrobiu...
AGE55955     138 ----------------------------------------------------------------ndgysTTADGSKLsa- 152 Acanthocystis t...
PYS49262     106 --------------------------------------------------------------------gRGASGMGVr-- 115 Acidobacteria b...
OON98205     165 ----------------------------------------------------------------ggfegMNAIGGLLe-- 178 Epulopiscium sp...
PYP65769      76 --------------------------------------------------------------------gTTRRGRYVr-- 85  Gemmatimonadete...
WP_057232392 116 ----------------------------------------------------------------nggytVTCTGQPLq-- 129 Clostridium per...
PTY01046     410 ---------------------------------------------------------------yytsknLASTGVTLk-- 424 Verrucomicrobia...
OGG02884      46 -------------------------------------------------------------lphdmdrnMTSTGGTSk-- 62  Candidatus Gott...
2PI8_A       254 ----gRASVASDRSii--ppGTTLIAEvplldnngkfngqyeLRLXVALDVGGai----------------kgQHFAIYQ 311 Escherichia col...
OGY25985     132 gaeqkTRYAACDPNyw--pyGTRMTIVgd-----------pnEYEWICIDTGSavv---------------gpAHWDVWF 183 Candidatus Woyk...
WP_009962421  64 ---grVRSAATDWSvy--pvGTVFQIEg-------------ePFLYEVDDYGSalv---------------gtNTIDLYR 110 Verrucomicrobiu...
AGE55955     153 ----gSKIIAVNKGrwnelkGKKINIGg--------------FGTYTVKDTCSsc----------------saNHIDVLV 198 Acanthocystis t...
PYS49262     116 -----LGTIAADPKil--pyGTRVLIDag-----------qySGEYVVTDAGTai----------------rgRKVDIWL 161 Acidobacteria b...
OON98205     179 -----VGSIAAPKDip---fGTSIIIPnlps--------dvnTAIFEVDDRGGaikrl-----------sdnkIKLDIYV 231 Epulopiscium sp...
PYP65769      86 -----PGIVAADRRlf--plSRYIELYage----------kyLGRFLIDDTGSmi----------------rgAHIDVWV 132 Gemmatimonadete...
WP_057232392 130 -----YGIVASNVYp----lGTKIYLEg--------------YGLFTVADRGGshf--------------dnyNRLDVLI 172 Clostridium per...
PTY01046     425 -----RGHISIDPKii--ryGTRVRLEg--------------MGEFIAVDTGGdvvnrraarragktaeekaaIVVDIYF 483 Verrucomicrobia...
OGG02884      63 -----FGVVSADPEii--pfFSYIHIPg-------------fANTFIVEDSNAgv----------------kgDHIEVYL 106 Candidatus Gott...
2PI8_A       312 GIGpeag--------hraGWYNHYGRV 330 Escherichia coli K12
OGY25985     184 YSQadgea------yldtLGTTVTIEI 204 Candidatus Woykebacteria bacterium RBG_16_44_10
WP_009962421 111 PDKaam---------kqwGAKNVNIKV 128 Verrucomicrobium spinosum
AGE55955     199 GSKaea---------mknGVKNSTCTV 216 Acanthocystis turfacea Chlorella virus MO0605SPH
PYS49262     162 PTYtqa---------crfGRRNVKLTV 179 Acidobacteria bacterium
OON98205     232 PRLynet-------dreyYKRVNALGV 251 Epulopiscium sp. Nele67-Bin005
PYP65769     133 PTCrea---------kifGRQHGTAML 150 Gemmatimonadetes bacterium
WP_057232392 173 PKEgdesvsqyrrrvnnmGKPHVKGYI 199 Clostridium perfringens
PTY01046     484 PTKaegla------fkarHKRFIMATW 504 Verrucomicrobia bacterium LW23
OGG02884     107 PTEkev---------kdfGTKRATIEV 124 Candidatus Gottesmanbacteria bacterium RBG_16_37_8
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