Conserved Protein Domain Family
OTU_plant_OTU3-like

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cd22759: OTU_plant_OTU3-like 
OTU (ovarian tumor) domain of deubiquitinating enzyme OTU3 from plants and similar proteins
Deubiquitinating enzyme OTU3, also called OTU domain-containing protein 3, is a deubiquitinase (DUB) or ubiquitin thiolesterase (EC 3.4.19.12) that catalyzes the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin, a small regulatory protein that can be conjugated to a large range of target proteins. Protein ubiquitination is a post-translational modification of mostly Lys residues that regulates many cellular processes, including protein degradation, intracellular trafficking, cell signaling, autophagy, transcription, translation, and the DNA damage response. OTU3 may play an important regulatory role at the level of protein turnover by preventing degradation. OTU3 belongs to the OTU family of cysteine proteases that use a conserved cysteine, histidine, and an aspartate, as the catalytic triad.
Statistics
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PSSM-Id: 438596
Aligned: 12 rows
Threshold Bit Score: 254.188
Created: 21-Sep-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putativeactive site
Feature 1:putative polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #                                                                 #
Q8GYW0        74 EKYAVDRVKGDGRCLFRALVKGMAfnkgitLNPQRERDDADELRMAVKEVICNDPKERekyk---ealvAITVDESLKRF 150 Arabidopsis tha...
XP_024404231  73 EHFTVRRIVGDGRCMFRALVQGMAlnkgmnLNSTEEEQEADQLRFAVMDAICRSDKRRtlye---ealiAITVEESLKRY 149 Physcomitrella ...
XP_022840452  63 EFYDVVRVRGDGRCMFRALALALAnvagrvMTSGEEEREADELRLAVAESLCRTPEKRqdfs---eavmAISYEQGLETY 139 Ostreococcus tauri
XP_024539225  70 EHYTVFRIAGDGRCMFRALAQGLAankgvrMSGKEEKEEADQLKMAVREALCTSEQERrqhe---daliSVTVDESLKRY 146 Selaginella moe...
PSC69777      70 TGLRVVRVAGDGRCMFRALAQGLArnqgrfLGGGAEEQEADQLRLAVAEALCRTAARRnefa---qavyAVEAEDKMQNY 146 Micractinium co...
ABK22809      80 EHFSVQKVRGDGRCMFRSLVKGMAtnkglsLSPREEEEDADELRIAVSEAVCGSEKERrtye---ealiAITVEESLKQY 156 Sitka spruce
XP_011398865  12 EKLKVVKIQGDGRCMFRAIAQGLArnkgifLGPEVEVQEADQLRGAVTEGLCRSKKRRadfk---ealvSIQTEDSLDNY 88  Auxenochlorella...
QDZ19378     101 ERFKVFQVMGDGRCMFRALVIGLAltkgkfVSKRSEEAEADTLRIAAAEALCRSARIQdryad--saftVKSEYGSVDNY 178 Chloropicon primus
GAQ88970      99 EHLRLVKIRGDGKCLFRAMACGLAank-geVLGFREEEEADSLRLAVHDALCTNERRRrqye---ealiAITLDQSVERY 174 Klebsormidium n...
XP_007509834  75 EHYQRVKIKGDGRCMFRALALGLAhisklnLTSSEETREADTLRTAVFEQMCREEEKRkehaeanmsikYGGEADGIEGY 154 Bathycoccus pra...
XP_004302665  73 ETYTVQRVAPDGQCLFRAVVKGMAandgstLSQREEKKRLEELRRAVKDFTCSEYEKQhpqy----eavRKAIVGKFDRY 148 Fragaria vesca ...
XP_005649558  48 THLRVVPIKGDGRCLFRAMVKGLArakgefVGGRTEEADADELRRAVADALCRGPERLrsfke--vlpsIEAFEGGLRRY 125 Coccomyxa subel...
Feature 1          #      ####                                   # #                             
Q8GYW0       151 CQRIGrhDFWGGESELLVLSKLCkQPIIVYIPEhehgrgggygpGFIPIQEYGSEFrggwg-------------kgktnK 217 Arabidopsis tha...
XP_024404231 150 CQRIPnsSFWGGESELLVLSRMCsQPVIVYIPEseakqaarwgtGYIPIAEYGSEYtkpgk--------------drkaR 215 Physcomitrella ...
XP_022840452 140 CRRILepAFWGGEPELLVLSRLIkRPIMVYIHAsqakn--aeghGFVAIQTYGEEFskg------------------gkR 199 Ostreococcus tauri
XP_024539225 147 CQRIVrqDFWGGDSELLVLSRMLgQPITVYIPEselkqgarwgtGYIPIAEYGSEFskstk--------------erkgR 212 Selaginella moe...
PSC69777     147 CRRIMapTFWGGEPELLVLSQMLrVPILVYIPAreags-rgggsGYVPIQTYGEQFlhgsgkkkkaggggggkpagkkkR 225 Micractinium co...
ABK22809     157 CQKIQhpNFWGGESELLVLSKMLsQPIIVYIPEseakqggkwgtGFIPIAEYGEEFmkpsk--------------qrkgR 222 Sitka spruce
XP_011398865  89 CRRLQnpSFWGGEPELLVLSKMLrVPIYVYTKEqgf------aaGYSPLYKVGEKFakagk--------------dwkkR 148 Auxenochlorella...
QDZ19378     179 CELVKtpDFWGGNAELMVLSDMLeQPIVVYRPErear---gkgkGFVPYVYYGTEYlreta--------------kgkvK 241 Chloropicon primus
GAQ88970     175 CTRLSrpDFWGGEPEMLVLSRMLkLPIYVYVPEsttrfksalgsGFVPIQQYGEEFekstk--------------tkkpR 240 Klebsormidium n...
XP_007509834 155 CRRIQkdDFWGGETELLVLAKLVkRPIMVYLPAhmakn-aasgsGYVCIQTYGEEYakktnkk----------tgkvteR 223 Bathycoccus pra...
XP_004302665 149 CERITkpNFWGGKSELLALSQVYkLPIIVYIPApkhpn-ggggsGFIPFQKYGTEFgea-----------------wggR 210 Fragaria vesca ...
XP_005649558 126 CVRLQspTFWGGEVEILILSKMLkAPIFVFQRAeeag---rkgnGYIPIVKYGEEFaepkk--------------grkpR 188 Coccomyxa subel...
Feature 1              #   ###    
Q8GYW0       218 NVVRLLYSGRNHYDLLR 234 Arabidopsis thaliana
XP_024404231 216 KPVRLLYNGSNHYDLLI 232 Physcomitrella patens
XP_022840452 200 KPCRLLYNGENHYDLLI 216 Ostreococcus tauri
XP_024539225 213 KPVRLLFSGSNHYDLLI 229 Selaginella moellendorffii
PSC69777     226 RVVRLLYSGSNHYDLLL 242 Micractinium conductrix
ABK22809     223 KPVRLLYSGSNHYDLLI 239 Sitka spruce
XP_011398865 149 KPVKLLYSNGNHYDLLT 165 Auxenochlorella protothecoides
QDZ19378     242 KPVNLLYSKGNHYDLLV 258 Chloropicon primus
GAQ88970     241 KPVRLLYNGHNHFDLLI 257 Klebsormidium nitens
XP_007509834 224 APVRLLYDGSVHYDLLI 240 Bathycoccus prasinos
XP_004302665 211 KTVRLLLSGSNHYDLLV 227 Fragaria vesca subsp. vesca
XP_005649558 189 APVKLLYSSGNHYDLLL 205 Coccomyxa subellipsoidea C-169

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