Conserved Protein Domain Family
OTU_plant_OTU3_4-like

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cd22746: OTU_plant_OTU3_4-like 
OTU (ovarian tumor) domain of deubiquitinating enzymes OTU3 and OTU4 from plants, and similar proteins
Deubiquitinating enzyme OTU3 (also called OTU domain-containing protein 3) and deubiquitinating enzyme OTU4 (also called OTU domain-containing protein 4) are deubiquitinases (DUBs) or ubiquitin thiolesterases (EC 3.4.19.12) that catalyze the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin, a small regulatory protein that can be conjugated to a large range of target proteins. Protein ubiquitination is a post-translational modification of mostly Lys residues that regulates many cellular processes, including protein degradation, intracellular trafficking, cell signaling, autophagy, transcription, translation, and the DNA damage response. OTU3 and OTU4 may play important regulatory roles at the level of protein turnover by preventing degradation. They belong to the OTU family of cysteine proteases that use a conserved cysteine, histidine, and an aspartate, as the catalytic triad.
Statistics
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PSSM-Id: 438583
Aligned: 18 rows
Threshold Bit Score: 147.415
Created: 6-Jul-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putativeactive site
Feature 1:putative polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #                                                                   
Q8LBZ4       167 DYSIIGIPGDGRCLFRSVAHGFClrsg-----------klapGEKMQRELADELRTRVADEFiqrr-----------qet 224 thale cress
GAQ77693     153 SAVRQKVFGDGRCAFRALGRAAFpdlldrcqrdsrglaldedVRADERQIADLLRMQVAEAFranse----------emg 222 Klebsormidium n...
Q8GYW0        75 KYAVDRVKGDGRCLFRALVKGMAfnkg------------itlNPQRERDDADELRMAVKEVIcndpkere---kykealv 139 thale cress
PXF40154     372 RLRRSEVRGDGRCLFRSLVRCRFdasg-----------laipSERVEKYEADQLRIRAVAELrqhrq---------llar 431 Gracilariopsis ...
XP_005704922 317 RLSRCSVVGDGRCLFRAVAKGRAyaigi----------dnlwSEKVEKDEADKLRSRVVAELkkrkd---------llte 377 Galdieria sulph...
XP_005539132 263 QLRIDPTRGDGRCLFRSVVRGLAfyagly--------pgskwSERRERREADILRYLCVREMrkhrd---------lflr 325 Cyanidioschyzon...
GBF95281     101 GFTRVGVKGDGACMFRSLVQGNAllrt-----------gslmPSEEEAAAAQQLRAGVVERLracqsdi-----epfipg 164 Raphidocelis su...
GAX82379      91 SFKLFKVVGDGACMFRAIVQGVQistr-----------gtplSPDSETKAALTLRIAVVQELkskksei-----eafipg 154 Chlamydomonas e...
OSX72500       1 MLVTAPVRGDGRCLFRAVVRGRAhnggr----------lakwSERIEREEADALRRRCVDELvvhrellsqycvlglgdg 70  laver
KXZ55075      87 AFRVHRISGDGACMFRAVVQGAQyatr-----------gkpmPPESEGAAAHNLRLAVVAELrkrrde--------iepf 147 Gonium pectorale
Feature 1                  #  #      ####                                                        
Q8LBZ4       225 eWFVEGDFDTYVRQIRdpHVWGGEPELFMASHVLq-MPITVYMKddka----------------------------gglI 275 thale cress
GAQ77693     223 gLVESLDLDSYVKSLMevTTWAGELELYLAAKHVldRVVEVWVLpegkeeglregvsegekegvmpekkkgwggagaqpK 302 Klebsormidium n...
Q8GYW0       140 aITVDESLKRFCQRIGrhDFWGGESELLVLSKLCk-QPIIVYIPehehgrg---------------------ggygpgfI 197 thale cress
PXF40154     432 fFVIEGNFALYTRRMSnpRTYGGEPELLMLAKLLh-VPIAVYILrng------------------------------kyR 480 Gracilariopsis ...
XP_005704922 378 fCVVEGNFDEYVQNIAktYTYAGEPELLLLASILh-MPIAVYVYdsqass-----------------------mdtgpfR 433 Galdieria sulph...
XP_005539132 326 dQVVEEDFDEHLRRLVhsDEFAGEPELLILGPLLq-TPICVYMStgdqadanaars------------ssnertkssdlF 392 Cyanidioschyzon...
GBF95281     165 iVDGVESFDAYCDRMArpGTWGGEPELAMAIHVLg-RPIGVWSPgpg------------------------------gpS 213 Raphidocelis su...
GAX82379     155 iLDGDLTWEDYLQRMShpDAWGGEPEMLMAANIVr-RAINVWRIgpe-----------------------------gnaE 204 Chlamydomonas e...
OSX72500      71 dADGDAEFQAYCKRMRhpKTYGGEPELLMTALLLh-CPIAVYVRqrgaga-----------------------pgtgplR 126 laver
KXZ55075     148 lPGIAADFDEYCRTMShpMAWGGEPEMVMAVHVVg-RPITVFHVpeqg----------------------------galE 198 Gonium pectorale
Feature 1         # #                      #   ###    
Q8LBZ4       276 SIAEYGQeyg--------kdDPIRVLYHgFGHYDALL 304 thale cress
GAQ77693     303 CIQRYETegag------qklEPLRLLYNgRDHWDLYV 333 Klebsormidium nitens
Q8GYW0       198 PIQEYGSefrggwgkgktnkNVVRLLYSgRNHYDLLR 234 thale cress
PXF40154     481 QIQVYGKqy---------rgEPYRILYSdGIHYDALL 508 Gracilariopsis chorda
XP_005704922 434 QIQLYGRqf---------rgEPLHLLYSdGMHYDLLV 461 Galdieria sulphuraria
XP_005539132 393 LVAVYGRsf---------iaEPVSLRYQ-SMHYDLLL 419 Cyanidioschyzon merolae strain 10D
GBF95281     214 HIITYGEesf--------tePPLHVLWS-GSHYDLLI 241 Raphidocelis subcapitata
GAX82379     205 LIVTYGEell-------asgQSVNLLWHeAGHYDLLV 234 Chlamydomonas eustigma
OSX72500     127 QIQVYGRqy---------atVPLYVLYSdGMHYDALL 154 laver
KXZ55075     199 PIVTYGEglle------sglAPICLLWS-GAHYDLLL 228 Gonium pectorale

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